RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ACP7Q6ZNF0 438 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 SNX29P2Q8IUI4 249 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 BATF2Q8N1L9 274 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 GCSAMQ8N6F7 178 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 NEU4Q8WWR8 484 aaPredicted RBP10.38□□□□□ -0.75
TUBE1-202ENST00000368662 CXorf56Q9H5V9 222 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 AUNIPQ9H7T9 357 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 IFT22Q9H7X7 185 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.38□□□□□ -0.75
TUBE1-202ENST00000368662 PLEKHJ1Q9NW61 149 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 GABARAPH6UMI1 98 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 SULT1C2O00338 296 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 GSTZ1O43708 216 aaPredicted RBP10.37□□□□□ -0.75
TUBE1-202ENST00000368662 KNG1P01042 644 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 HIST1H1DP16402 221 aaKnown RBP10.37□□□□□ -0.75
TUBE1-202ENST00000368662 FUT3P21217 361 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 PRSS3P35030 304 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 TMEM50BP56557 158 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 MADCAM1Q13477 382 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 ZNF260Q3ZCT1 412 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 CDNFQ49AH0 187 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 ZFAND2BQ8WV99 257 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 SMIM4Q8WVI0 70 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 FCAMRQ8WWV6 532 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 CACNG6Q9BXT2 260 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 PLEKHF2Q9H8W4 249 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 SCPEP1Q9HB40 452 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 SH2D1BO14796 132 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 PDCD6O75340 191 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 GLAP06280 429 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 MELTFP08582 738 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 PMELP40967 661 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 IKZF1Q13422 519 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 PNLIPRP3Q17RR3 467 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 PLAC9Q5JTB6 97 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 C14orf79Q96F83 325 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 ARHGAP5-AS1Q96IT6 56 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 SDHCQ99643 169 aaPredicted RBP10.37□□□□□ -0.75
TUBE1-202ENST00000368662 SEBOXQ9HB31 216 aaPredicted RBP10.37□□□□□ -0.75
TUBE1-202ENST00000368662 DNAJB11Q9UBS4 358 aa10.37□□□□□ -0.75
TUBE1-202ENST00000368662 CHD3Q12873 2000 aaKnown RBP10.36□□□□□ -0.75
TUBE1-202ENST00000368662 IGHV1-69-2A0A0G2JMI3 117 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 MFNGO00587 321 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 CA11O75493 328 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 UPK1BO75841 260 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 GNB3P16520 340 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 CHATP28329 748 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 SNU13P55769 128 aaKnown RBP10.36□□□□□ -0.75
TUBE1-202ENST00000368662 GMFBP60983 142 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 MRPS11P82912 194 aaKnown RBP10.36□□□□□ -0.75
TUBE1-202ENST00000368662 HFEQ30201 348 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 NKAPLQ5M9Q1 402 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 ATAD3CQ5T2N8 411 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 HACD4Q5VWC8 232 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 TRIQKQ629K1 86 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 SIGIRRQ6IA17 410 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 OR8H2Q8N162 312 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 PECRQ9BY49 303 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 WDR13Q9H1Z4 485 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 DLL4Q9NR61 685 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 TMEM106BQ9NUM4 274 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 RCC2Q9P258 522 aaKnown RBP10.36□□□□□ -0.75
TUBE1-202ENST00000368662 NLKQ9UBE8 527 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 IL36RNQ9UBH0 155 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 LRBAP50851 2863 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 UTP20O75691 2785 aaKnown RBP10.36□□□□□ -0.75
TUBE1-202ENST00000368662 RAI1Q7Z5J4 1906 aaPredicted RBP10.36□□□□□ -0.75
TUBE1-202ENST00000368662 WNT9BO14905 357 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 DEGS1O15121 323 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 HPXP02790 462 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 SSBP1Q04837 148 aaKnown RBP10.36□□□□□ -0.75
TUBE1-202ENST00000368662 RBM39Q14498 530 aaKnown RBP10.36□□□□□ -0.75
TUBE1-202ENST00000368662 MICBQ29980 383 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 ST8SIA4Q92187 359 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 CCL17Q92583 94 aa10.36□□□□□ -0.75
TUBE1-202ENST00000368662 THAP7Q9BT49 309 aaPredicted RBP10.36□□□□□ -0.75
TUBE1-202ENST00000368662 ZMAT3Q9HA38 289 aaKnown RBP10.36□□□□□ -0.75
TUBE1-202ENST00000368662 DCHS2Q6V1P9 2916 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 TMEM235A6NFC5 223 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 HAND1O96004 215 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 LPLP06858 475 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 IL7P13232 177 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 ZNF44P15621 663 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 MUC1P15941 1255 aaPredicted RBP10.35□□□□□ -0.75
TUBE1-202ENST00000368662 INPP1P49441 399 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 GNG2P59768 71 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 MRPS15P82914 257 aaKnown RBP10.35□□□□□ -0.75
TUBE1-202ENST00000368662 SCN1BQ07699 218 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 BAK1Q16611 211 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 DNM1P46Q6ZS02 220 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 C6orf201Q7Z4U5 140 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 ABCB10Q9NRK6 738 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 OR14J1Q9UGF5 321 aa10.35□□□□□ -0.75
TUBE1-202ENST00000368662 OR2AT4A6NND4 320 aa10.34□□□□□ -0.75
TUBE1-202ENST00000368662 MCRIP1C9JLW8 97 aa10.34□□□□□ -0.75
TUBE1-202ENST00000368662 TMEM178BH3BS89 294 aa10.34□□□□□ -0.75
TUBE1-202ENST00000368662 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.34□□□□□ -0.75
TUBE1-202ENST00000368662 OR2H2O95918 312 aa10.34□□□□□ -0.75
TUBE1-202ENST00000368662 CYB5R3P00387 301 aaPredicted RBP10.34□□□□□ -0.75
TUBE1-202ENST00000368662 CSF3P09919 207 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms