RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CCDC58Q4VC31 144 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 RPL22L1Q6P5R6 122 aaKnown RBP15.47■□□□□ 0.07
CKS1B-203ENST00000368439 SERPINA12Q8IW75 414 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 FAM58AQ8N1B3 248 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 C3orf56Q8N813 242 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 ASCC1Q8N9N2 400 aaKnown RBP15.47■□□□□ 0.07
CKS1B-203ENST00000368439 ZNF485Q8NCK3 441 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 OR52N4Q8NGI2 321 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 OR5D13Q8NGL4 314 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 SNX22Q96L94 193 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 ZNRD1Q9P1U0 126 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 NKX1-2Q9UD57 310 aaPredicted RBP15.47■□□□□ 0.07
CKS1B-203ENST00000368439 DHDHQ9UQ10 334 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 EXOSC1Q9Y3B2 195 aaKnown RBP15.47■□□□□ 0.07
CKS1B-203ENST00000368439 OGG1O15527 345 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 SULT1B1O43704 296 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 CALCBP10092 127 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 EEF1B2P24534 225 aaKnown RBP15.46■□□□□ 0.07
CKS1B-203ENST00000368439 SAA4P35542 130 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 ZP1P60852 638 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 RELBQ01201 579 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 ACSM1Q08AH1 577 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 FIP1L1Q6UN15 594 aaKnown RBP15.46■□□□□ 0.07
CKS1B-203ENST00000368439 TCF23Q7RTU1 214 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 OR8H2Q8N162 312 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 OR5D18Q8NGL1 313 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 OR5D14Q8NGL3 314 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 TBC1D15Q8TC07 691 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 TMEM80Q96HE8 168 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 DCLRE1BQ9H816 532 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 HMG20AQ9NP66 347 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 BABAM2Q9NXR7 383 aa15.46■□□□□ 0.07
CKS1B-203ENST00000368439 C17orf98A8MV24 154 aa15.45■□□□□ 0.06
CKS1B-203ENST00000368439 PSPNO60542 156 aa15.45■□□□□ 0.06
CKS1B-203ENST00000368439 CYB5AP00167 134 aa15.45■□□□□ 0.06
CKS1B-203ENST00000368439 FBP1P09467 338 aa15.45■□□□□ 0.06
CKS1B-203ENST00000368439 PIPP12273 146 aaPredicted RBP15.45■□□□□ 0.06
CKS1B-203ENST00000368439 PRKACAP17612 351 aa15.45■□□□□ 0.06
CKS1B-203ENST00000368439 DUSP1P28562 367 aa15.45■□□□□ 0.06
CKS1B-203ENST00000368439 SPIN3Q5JUX0 258 aa15.45■□□□□ 0.06
CKS1B-203ENST00000368439 TMPRSS11AQ6ZMR5 421 aa15.45■□□□□ 0.06
CKS1B-203ENST00000368439 SAXO1Q8IYX7 474 aa15.45■□□□□ 0.06
CKS1B-203ENST00000368439 TSEN15Q8WW01 171 aaKnown RBP15.45■□□□□ 0.06
CKS1B-203ENST00000368439 C17orf50Q8WW18 174 aa15.45■□□□□ 0.06
CKS1B-203ENST00000368439 ZNF747Q9BV97 191 aa15.45■□□□□ 0.06
CKS1B-203ENST00000368439 FAM96BQ9Y3D0 163 aa15.45■□□□□ 0.06
CKS1B-203ENST00000368439 A0A1W2PPH5 198 aa15.44■□□□□ 0.06
CKS1B-203ENST00000368439 MEIOCA2RUB1 952 aa15.44■□□□□ 0.06
CKS1B-203ENST00000368439 ST3GAL4Q11206 333 aa15.44■□□□□ 0.06
CKS1B-203ENST00000368439 KISS1Q15726 138 aa15.44■□□□□ 0.06
CKS1B-203ENST00000368439 TAF9Q16594 264 aa15.44■□□□□ 0.06
CKS1B-203ENST00000368439 C8orf59Q8N0T1 100 aaPredicted RBP15.44■□□□□ 0.06
CKS1B-203ENST00000368439 OR4S1Q8NGB4 309 aa15.44■□□□□ 0.06
CKS1B-203ENST00000368439 OR51A2Q8NGJ7 313 aa15.44■□□□□ 0.06
CKS1B-203ENST00000368439 OR52N1Q8NH53 320 aa15.44■□□□□ 0.06
CKS1B-203ENST00000368439 TFAP2CQ92754 450 aa15.44■□□□□ 0.06
CKS1B-203ENST00000368439 RHOFQ9HBH0 211 aa15.44■□□□□ 0.06
CKS1B-203ENST00000368439 PLCXD1Q9NUJ7 323 aa15.44■□□□□ 0.06
CKS1B-203ENST00000368439 C1RLQ9NZP8 487 aa15.44■□□□□ 0.06
CKS1B-203ENST00000368439 PSORS1C1Q9UIG5 152 aa15.44■□□□□ 0.06
CKS1B-203ENST00000368439 SF3B6Q9Y3B4 125 aaKnown RBP15.44■□□□□ 0.06
CKS1B-203ENST00000368439 XPNPEP2O43895 674 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 OCM2P0CE71 109 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 OCMP0CE72 109 aaPredicted RBP15.43■□□□□ 0.06
CKS1B-203ENST00000368439 MYL12AP19105 171 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 MDKP21741 143 aaPredicted RBP15.43■□□□□ 0.06
CKS1B-203ENST00000368439 OMGP23515 440 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 OR3A1P47881 315 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 SOX2P48431 317 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 SNU13P55769 128 aaKnown RBP15.43■□□□□ 0.06
CKS1B-203ENST00000368439 DOC2BQ14184 412 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 MIDNQ504T8 468 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 DMKNQ6E0U4 476 aaPredicted RBP15.43■□□□□ 0.06
CKS1B-203ENST00000368439 GDPD3Q7L5L3 318 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 ZSCAN4Q8NAM6 433 aaPredicted RBP15.43■□□□□ 0.06
CKS1B-203ENST00000368439 GPR148Q8TDV2 347 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 NRG4Q8WWG1 115 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 DYRK2Q92630 601 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 SMIM19Q96E16 107 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 CHST6Q9GZX3 395 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 CNOT2Q9NZN8 540 aaKnown RBP15.43■□□□□ 0.06
CKS1B-203ENST00000368439 MMP24Q9Y5R2 645 aa15.43■□□□□ 0.06
CKS1B-203ENST00000368439 MEX3AA1L020 520 aaKnown RBP15.42■□□□□ 0.06
CKS1B-203ENST00000368439 GPR137BO60478 399 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 NDUFA7O95182 113 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 OR2H2O95918 312 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 HCKP08631 526 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 RAB3AP20336 220 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 LMO1P25800 156 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 EDDM3BP56851 147 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 RPL15P61313 204 aaKnown RBP15.42■□□□□ 0.06
CKS1B-203ENST00000368439 MEF2CQ06413 473 aaPredicted RBP15.42■□□□□ 0.06
CKS1B-203ENST00000368439 SLC34A1Q06495 639 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 GRK1Q15835 563 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 Q6P435 159 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 TPRX1Q8N7U7 411 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 BEND2Q8NDZ0 799 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 DPAGT1Q9H3H5 408 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 HEXA-AS1Q9H8Q6 139 aa15.42■□□□□ 0.06
CKS1B-203ENST00000368439 NEK6Q9HC98 313 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms