RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ANXA10Q9UJ72 324 aa10.8□□□□□ -0.68
PTPRK-203ENST00000368207 YIF1AO95070 293 aa10.8□□□□□ -0.68
PTPRK-203ENST00000368207 IFI6P09912 130 aa10.8□□□□□ -0.68
PTPRK-203ENST00000368207 CXCL3P19876 107 aa10.8□□□□□ -0.68
PTPRK-203ENST00000368207 LHX4Q969G2 390 aa10.8□□□□□ -0.68
PTPRK-203ENST00000368207 SLC35E1Q96K37 410 aa10.8□□□□□ -0.68
PTPRK-203ENST00000368207 BCL2L11O43521 198 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 ICMTO60725 284 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 ACKR3P25106 362 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 PIGYQ3MUY2 71 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 FAM27BQ5VT28 67 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 LYG1Q8N1E2 194 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 APCDD1LQ8NCL9 501 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 KCNK17Q96T54 332 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 KCNIP2Q9NS61 270 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 ZNF629Q9UEG4 869 aaPredicted RBP10.79□□□□□ -0.68
PTPRK-203ENST00000368207 CACNA1DQ01668 2161 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 IGLV1-36A0A0B4J1U3 117 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 ADAM10O14672 748 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 OR5AC1P0C628 307 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 TEX261Q6UWH6 196 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 BHLHA15Q7RTS1 189 aaPredicted RBP10.79□□□□□ -0.68
PTPRK-203ENST00000368207 ZNF75AQ96N20 296 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 DDA1Q9BW61 102 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 MSL2Q9HCI7 577 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 MRPL22Q9NWU5 206 aaKnown RBP10.79□□□□□ -0.68
PTPRK-203ENST00000368207 U3KQ87 197 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 MTCL1Q9Y4B5 1905 aaKnown RBP10.79□□□□□ -0.68
PTPRK-203ENST00000368207 COL6A6A6NMZ7 2263 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 GSTZ1O43708 216 aaPredicted RBP10.79□□□□□ -0.68
PTPRK-203ENST00000368207 TAGLN2P37802 199 aaKnown RBP10.79□□□□□ -0.68
PTPRK-203ENST00000368207 SUB1P53999 127 aaKnown RBP eCLIP10.79□□□□□ -0.68
PTPRK-203ENST00000368207 GNB2P62879 340 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 EGR4Q05215 589 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 MDP1Q86V88 176 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 CHST5Q9GZS9 411 aa10.79□□□□□ -0.68
PTPRK-203ENST00000368207 A0A1W2PP11 408 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 LINC00271P0C7V0 271 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 PSG4Q00888 419 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 Q3ZCU0 254 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 ZBTB37Q5TC79 503 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 DYRK2Q92630 601 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 PPP1R3EQ9H7J1 279 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 PCDHGA9Q9Y5G4 932 aaKnown RBP10.78□□□□□ -0.68
PTPRK-203ENST00000368207 INTS1Q8N201 2190 aaKnown RBP10.78□□□□□ -0.68
PTPRK-203ENST00000368207 MDC1Q14676 2089 aaKnown RBP10.78□□□□□ -0.68
PTPRK-203ENST00000368207 CTDSPLO15194 276 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 ADAM20O43506 726 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 SEMA7AO75326 666 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 CT45A6P0DMU7 189 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 CT45A5P0DMU8 189 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 CT45A7P0DMV0 189 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 CD37P11049 281 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 LRRC10Q5BKY1 277 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 CT45A1Q5HYN5 189 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 LFNGQ8NES3 379 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 CT45A3Q8NHU0 189 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 SLC25A40Q8TBP6 338 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 ST6GAL2Q96JF0 529 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 ADGRG7Q96K78 797 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 VWA8A3KMH1 1905 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 LMX1BO60663 402 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 FCGR3BO75015 233 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 DUS4LO95620 317 aaKnown RBP10.78□□□□□ -0.68
PTPRK-203ENST00000368207 PGA4P0DJD7 388 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 PGA3P0DJD8 388 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 SULT1A3P0DMM9 295 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 SULT1A4P0DMN0 295 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 BCL3P20749 454 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 GGNBP1Q5YKI7 109 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 ZNF574Q6ZN55 896 aaPredicted RBP10.78□□□□□ -0.68
PTPRK-203ENST00000368207 MOB1BQ7L9L4 216 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 S100A7AQ86SG5 101 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 PGLYRP3Q96LB9 341 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 PPP1R14DQ9NXH3 145 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 CYB5R1Q9UHQ9 305 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 LAMP3Q9UQV4 416 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 HMGN3Q15651 99 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 UBAC2Q8NBM4 344 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 MS4A3Q96HJ5 214 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 TAAR6Q96RI8 345 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 OR2J1Q9GZK6 312 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 GPR27Q9NS67 375 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 EP400Q96L91 3159 aa10.78□□□□□ -0.68
PTPRK-203ENST00000368207 TXNL1O43396 289 aa10.77□□□□□ -0.68
PTPRK-203ENST00000368207 RPUSD3Q6P087 351 aaKnown RBP10.77□□□□□ -0.68
PTPRK-203ENST00000368207 C17orf78Q8N4C9 275 aa10.77□□□□□ -0.68
PTPRK-203ENST00000368207 SPICQ8N5J4 248 aa10.77□□□□□ -0.68
PTPRK-203ENST00000368207 CXXC4Q9H2H0 198 aa10.77□□□□□ -0.68
PTPRK-203ENST00000368207 NAA60Q9H7X0 242 aa10.77□□□□□ -0.68
PTPRK-203ENST00000368207 MED9Q9NWA0 146 aa10.77□□□□□ -0.68
PTPRK-203ENST00000368207 STARD10Q9Y365 291 aa10.77□□□□□ -0.68
PTPRK-203ENST00000368207 ANKRD36A6QL64 1941 aa10.77□□□□□ -0.68
PTPRK-203ENST00000368207 DOCK4Q8N1I0 1966 aa10.77□□□□□ -0.68
PTPRK-203ENST00000368207 MPC2O95563 127 aa10.77□□□□□ -0.69
PTPRK-203ENST00000368207 SKA3Q8IX90 412 aa10.77□□□□□ -0.69
PTPRK-203ENST00000368207 FGF11Q92914 225 aa10.77□□□□□ -0.69
PTPRK-203ENST00000368207 RAB18Q9NP72 206 aa10.77□□□□□ -0.69
PTPRK-203ENST00000368207 C3orf85A0A1B0GTC6 90 aa10.77□□□□□ -0.69
PTPRK-203ENST00000368207 MDFIC2A0A1B0GVS7 189 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms