RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 ZNF146Q15072 292 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 KISS1Q15726 138 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 RNLSQ5VYX0 342 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 TMEM200BQ69YZ2 307 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 DMKNQ6E0U4 476 aaPredicted RBP8.1□□□□□ -1.11
CD48-202ENST00000368046 METAP1DQ6UB28 335 aaPredicted RBP8.1□□□□□ -1.11
CD48-202ENST00000368046 FIP1L1Q6UN15 594 aaKnown RBP8.1□□□□□ -1.11
CD48-202ENST00000368046 BRD3OSQ6XYD6 125 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 VMO1Q7Z5L0 202 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 SAXO1Q8IYX7 474 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 NANOGP1Q8N7R0 232 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 ZSCAN4Q8NAM6 433 aaPredicted RBP8.1□□□□□ -1.11
CD48-202ENST00000368046 TSEN15Q8WW01 171 aaKnown RBP8.1□□□□□ -1.11
CD48-202ENST00000368046 EMG1Q92979 244 aaKnown RBP8.1□□□□□ -1.11
CD48-202ENST00000368046 SMIM19Q96E16 107 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 SNX22Q96L94 193 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 UNKLQ9H9P5 680 aaKnown RBP8.1□□□□□ -1.11
CD48-202ENST00000368046 NOX4Q9NPH5 578 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 ESM1Q9NQ30 184 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 FKBP14Q9NWM8 211 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 SCN3BQ9NY72 215 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 GLS2Q9UI32 602 aa8.1□□□□□ -1.11
CD48-202ENST00000368046 IGHV1-69DA0A0B4J2H0 117 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 PTGES3LE9PB15 166 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 SH2D1BO14796 132 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 ZNF737O75373 536 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 KDM4BO94953 1096 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 IGHV1-69P01742 117 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 ALDOBP05062 364 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 CD1AP06126 327 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 HCKP08631 526 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 TMEM225BP0DP42 221 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 BCL3P20749 454 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 AQP4P55087 323 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 RPL31P62899 125 aaKnown RBP8.09□□□□□ -1.11
CD48-202ENST00000368046 UBA52P62987 128 aaKnown RBP8.09□□□□□ -1.11
CD48-202ENST00000368046 RIPK1Q13546 671 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 DEFB112Q30KQ8 113 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 YIF1BQ5BJH7 314 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 ZNF529Q6P280 563 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 CRIP3Q6Q6R5 217 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 AHSA2Q719I0 299 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 RNF144BQ7Z419 303 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.09□□□□□ -1.11
CD48-202ENST00000368046 RGP1Q92546 391 aaPredicted RBP8.09□□□□□ -1.11
CD48-202ENST00000368046 TNFRSF14Q92956 283 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 MYDGFQ969H8 173 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 TMEM106AQ96A25 262 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 RFT1Q96AA3 541 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 CPNE2Q96FN4 548 aaPredicted RBP8.09□□□□□ -1.11
CD48-202ENST00000368046 SPACA5Q96QH8 159 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 METTL8Q9H825 291 aaKnown RBP8.09□□□□□ -1.11
CD48-202ENST00000368046 ELL3Q9HB65 397 aaPredicted RBP8.09□□□□□ -1.11
CD48-202ENST00000368046 HMG20AQ9NP66 347 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 ERGIC3Q9Y282 383 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 TPRKBQ9Y3C4 175 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 PCDHGB5Q9Y5G0 923 aa8.09□□□□□ -1.11
CD48-202ENST00000368046 IGKV1-12A0A0C4DH73 117 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 TRBV5-5A0A0J9YX44 114 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 hCG_1809904A0A1W2PP81 198 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 A0A1W2PPE2 198 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 A0A1W2PR64 198 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 A0A1W2PRV1 198 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 TMEM89A2RUT3 159 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 RNASEK-C17orf49H0YIS7 233 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 CLDN34H7C241 214 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 MYL12BO14950 172 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 ANGPTL7O43827 346 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 GPX5O75715 221 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 HAND1O96004 215 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 IGKV1D-12P01611 117 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 CDK1P06493 297 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 PRKACAP17612 351 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 MYF6P23409 242 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 EEF1B2P24534 225 aaKnown RBP8.08□□□□□ -1.12
CD48-202ENST00000368046 LMO1P25800 156 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 UBE2E1P51965 193 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 WNT4P56705 351 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 MEF2CQ06413 473 aaPredicted RBP8.08□□□□□ -1.12
CD48-202ENST00000368046 ACSM1Q08AH1 577 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 SLC9A3R2Q15599 337 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 Q499Y3 187 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 SPIN3Q5JUX0 258 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 RUSC1-AS1Q66K80 236 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 ASCL4Q6XD76 172 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 Q6YL49 198 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 C17orf107Q6ZR85 190 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 GDPD3Q7L5L3 318 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 PDZD9Q8IXQ8 264 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 FAM185AQ8N0U4 392 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 C11orf42Q8N5U0 333 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 ASCC1Q8N9N2 400 aaKnown RBP8.08□□□□□ -1.12
CD48-202ENST00000368046 PXT1Q8NFP0 134 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 OR4M1Q8NGD0 313 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 PPP1R35Q8TAP8 253 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 SLC25A28Q96A46 364 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 CDCA4Q9BXL8 241 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 ANKRD60Q9BZ19 345 aa8.08□□□□□ -1.12
CD48-202ENST00000368046 ZMAT3Q9HA38 289 aaKnown RBP8.08□□□□□ -1.12
CD48-202ENST00000368046 TMEM138Q9NPI0 162 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms