RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 IQCF2Q8IXL9 164 aa12.38□□□□□ -0.43
CD48-201ENST00000368045 LINC00518Q8N0U6 118 aa12.38□□□□□ -0.43
CD48-201ENST00000368045 Q8NFD4 153 aa12.38□□□□□ -0.43
CD48-201ENST00000368045 OR10D3Q8NH80 312 aa12.38□□□□□ -0.43
CD48-201ENST00000368045 CPNE4Q96A23 557 aaPredicted RBP12.38□□□□□ -0.43
CD48-201ENST00000368045 ALKBH3Q96Q83 286 aaPredicted RBP12.38□□□□□ -0.43
CD48-201ENST00000368045 GINS3Q9BRX5 216 aa12.38□□□□□ -0.43
CD48-201ENST00000368045 C1QTNF5Q9BXJ0 243 aa12.38□□□□□ -0.43
CD48-201ENST00000368045 SLC2A9Q9NRM0 540 aa12.38□□□□□ -0.43
CD48-201ENST00000368045 TMED3Q9Y3Q3 217 aa12.38□□□□□ -0.43
CD48-201ENST00000368045 KPTNQ9Y664 436 aa12.38□□□□□ -0.43
CD48-201ENST00000368045 A0A0G2JMM0 328 aa12.37□□□□□ -0.43
CD48-201ENST00000368045 A0A1W2PPB8 328 aa12.37□□□□□ -0.43
CD48-201ENST00000368045 A0A1W2PRS3 328 aa12.37□□□□□ -0.43
CD48-201ENST00000368045 KIR3DP1A8MWS1 328 aa12.37□□□□□ -0.43
CD48-201ENST00000368045 GLAP06280 429 aa12.37□□□□□ -0.43
CD48-201ENST00000368045 RGS19P49795 217 aa12.37□□□□□ -0.43
CD48-201ENST00000368045 ZNF92Q03936 586 aa12.37□□□□□ -0.43
CD48-201ENST00000368045 FAM219AQ8IW50 185 aa12.37□□□□□ -0.43
CD48-201ENST00000368045 MSI2Q96DH6 328 aaKnown RBP12.37□□□□□ -0.43
CD48-201ENST00000368045 KIRREL1Q96J84 757 aa12.37□□□□□ -0.43
CD48-201ENST00000368045 ADAT1Q9BUB4 502 aaKnown RBP12.37□□□□□ -0.43
CD48-201ENST00000368045 FAM86C1Q9NVL1 165 aa12.37□□□□□ -0.43
CD48-201ENST00000368045 PARPBPQ9NWS1 579 aa12.37□□□□□ -0.43
CD48-201ENST00000368045 STRAPQ9Y3F4 350 aaKnown RBP12.37□□□□□ -0.43
CD48-201ENST00000368045 FAM157AC9JC47 383 aa12.36□□□□□ -0.43
CD48-201ENST00000368045 SCGB1D2O95969 90 aa12.36□□□□□ -0.43
CD48-201ENST00000368045 MMP7P09237 267 aaPredicted RBP12.36□□□□□ -0.43
CD48-201ENST00000368045 TDGF1P13385 188 aa12.36□□□□□ -0.43
CD48-201ENST00000368045 HOXA1P49639 335 aaPredicted RBP12.36□□□□□ -0.43
CD48-201ENST00000368045 UCP2P55851 309 aa12.36□□□□□ -0.43
CD48-201ENST00000368045 ERGIC1Q969X5 290 aa12.36□□□□□ -0.43
CD48-201ENST00000368045 MARS2Q96GW9 593 aaKnown RBP12.36□□□□□ -0.43
CD48-201ENST00000368045 PLA2G2EQ9NZK7 142 aa12.36□□□□□ -0.43
CD48-201ENST00000368045 ZNF581Q9P0T4 197 aa12.36□□□□□ -0.43
CD48-201ENST00000368045 LUZP4Q9P127 313 aa12.36□□□□□ -0.43
CD48-201ENST00000368045 TNRC6BQ9UPQ9 1833 aaKnown RBP12.36□□□□□ -0.43
CD48-201ENST00000368045 ST8SIA3O43173 380 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 TSPAN15O95858 294 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 SERPINA7P05543 415 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 DANCRP0C864 163 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 FXYD4P59646 89 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 SP6Q3SY56 376 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 TRIM61Q5EBN2 209 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 AVPI1Q5T686 147 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 COLCA1Q6ZS62 124 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 LYZL2Q7Z4W2 148 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 SAXO1Q8IYX7 474 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 SNIP1Q8TAD8 396 aaKnown RBP12.35□□□□□ -0.43
CD48-201ENST00000368045 GLYATL2Q8WU03 294 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 LINC00470Q9BZP3 86 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 PRO3102Q9H379 93 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 SAV1Q9H4B6 383 aaPredicted RBP12.35□□□□□ -0.43
CD48-201ENST00000368045 BIN3Q9NQY0 253 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 SMCO4Q9NRQ5 59 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 SDK1Q7Z5N4 2213 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 IGKV3D-15A0A087WSY6 115 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 CDS2O95674 445 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 PATE4P0C8F1 98 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 SPP1P10451 314 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 CD80P33681 288 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 RAB13P51153 203 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 CLDN15P56746 228 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 RND3P61587 244 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 PEA15Q15121 130 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 PHLDA2Q53GA4 152 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 ACER2Q5QJU3 275 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 FBXW12Q6X9E4 464 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 DMBX1Q8NFW5 382 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 PIGCQ92535 297 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 WNT2BQ93097 391 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 ABHD14BQ96IU4 210 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 SMIM3Q9BZL3 60 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 TCFL5Q9UL49 500 aa12.35□□□□□ -0.43
CD48-201ENST00000368045 RPL36A-HNRNPH2H7BZ11 118 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 F12P00748 615 aaPredicted RBP12.34□□□□□ -0.43
CD48-201ENST00000368045 OR8U9P0C7N5 309 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 RFPL3SP0C7P2 107 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 EDN3P14138 238 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 FOLR2P14207 255 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 AADACP22760 399 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 OTX2P32243 289 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 GFRA1P56159 465 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 Q0VFX4 171 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 SSPNQ14714 243 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 WIPI1Q5MNZ9 446 aaPredicted RBP12.34□□□□□ -0.43
CD48-201ENST00000368045 DCAF12Q5T6F0 453 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 OR5L1Q8NGL2 311 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 OR4D5Q8NGN0 318 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 OR8U1Q8NH10 309 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 FGFBP3Q8TAT2 258 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 DYRK2Q92630 601 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 ZNF442Q9H7R0 627 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 MED12Q93074 2177 aa12.34□□□□□ -0.43
CD48-201ENST00000368045 PHF1O43189 567 aaPredicted RBP12.33□□□□□ -0.44
CD48-201ENST00000368045 TRAPPC6AO75865 159 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 DIRAS3O95661 229 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 PPYP01298 95 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 COX5BP10606 129 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 GDF1P27539 372 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms