RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PATE4P0C8F1 98 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 CHATP28329 748 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 HAAOP46952 286 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 HTR5AP47898 357 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 RSU1Q15404 277 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 HIST2H3AQ71DI3 136 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 OR2G3Q8NGZ4 309 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 HAS2Q92819 552 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 RAB39BQ96DA2 213 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 MVB12AQ96EY5 273 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 Q96M66 194 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 ZNF385AQ96PM9 386 aaKnown RBP11.81□□□□□ -0.52
PRKN-205ENST00000366897 NELFAQ9H3P2 528 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 PLEK2Q9NYT0 353 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 DOK5Q9P104 306 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 URB1O60287 2271 aaKnown RBP11.81□□□□□ -0.52
PRKN-205ENST00000366897 IGKV1-27A0A075B6S5 117 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 IGHV1OR21-1A0A087WYE8 117 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 TGIF2-C20orf24A0A0A6YYL0 155 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 SHISA7A6NL88 538 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 H3BQ15 152 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 CD38P28907 300 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 TAGLN2P37802 199 aaKnown RBP11.81□□□□□ -0.52
PRKN-205ENST00000366897 RHEBQ15382 184 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 ZNF574Q6ZN55 896 aaPredicted RBP11.81□□□□□ -0.52
PRKN-205ENST00000366897 C17orf78Q8N4C9 275 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 SLC35G3Q8N808 338 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 Q8WTZ3 238 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 TP53RKQ96S44 253 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 PBDC1Q9BVG4 233 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 CHST5Q9GZS9 411 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 SIT1Q9Y3P8 196 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 NKX2-6A6NCS4 301 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 K7N7A8 449 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 ST8SIA3O43173 380 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 ATP6V0CP27449 155 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 UCP2P55851 309 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 EWSR1Q01844 656 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRKN-205ENST00000366897 ANKRD37Q7Z713 158 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 OR10D4PQ8NGN7 298 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 NTNG2Q96CW9 530 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 UCN2Q96RP3 112 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 TM2D1Q9BX74 207 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 C8orf33Q9H7E9 229 aaPredicted RBP11.81□□□□□ -0.52
PRKN-205ENST00000366897 HS3ST3B1Q9Y662 390 aa11.81□□□□□ -0.52
PRKN-205ENST00000366897 IGSF23A1L1A6 192 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 HEXBP07686 556 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 ERVFRD-1P60508 538 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 RND3P61587 244 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 GRB2P62993 217 aaKnown RBP11.8□□□□□ -0.52
PRKN-205ENST00000366897 LIAT1Q6ZQX7 453 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 OR6X1Q8NH79 312 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 MUCL1Q96DR8 90 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 M0R135 149 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 PTGDSP41222 190 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 GUCA1AP43080 201 aaPredicted RBP11.8□□□□□ -0.52
PRKN-205ENST00000366897 UBE2KP61086 200 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 ENDOGQ14249 297 aaKnown RBP11.8□□□□□ -0.52
PRKN-205ENST00000366897 FAM189A2Q15884 450 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 C4orf17Q53FE4 359 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 CYB561D1Q8N8Q1 229 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 TMEM171Q8WVE6 324 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 MSI2Q96DH6 328 aaKnown RBP11.8□□□□□ -0.52
PRKN-205ENST00000366897 ZNF799Q96GE5 643 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 MRGPRX4Q96LA9 322 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 NECAP2Q9NVZ3 263 aa11.8□□□□□ -0.52
PRKN-205ENST00000366897 ZNF724A8MTY0 619 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 C10orf142B7Z368 130 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 SSSCA1O60232 199 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 MDKP21741 143 aaPredicted RBP11.79□□□□□ -0.52
PRKN-205ENST00000366897 PMELP40967 661 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 RAB5CP51148 216 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 Q6ZPA2 131 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 NFAM1Q8NET5 270 aaPredicted RBP11.79□□□□□ -0.52
PRKN-205ENST00000366897 SLC39A7Q92504 469 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 YPEL4Q96NS1 127 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 OXGR1Q96P68 337 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 GPR61Q9BZJ8 451 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 SLC7A11Q9UPY5 501 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 KMT2EQ8IZD2 1858 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 SPINK2P20155 84 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 HOXA5P20719 270 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 EPHA1P21709 976 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 MSR1P21757 451 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 DUSP1P28562 367 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 CXorf66Q5JRM2 361 aaPredicted RBP11.79□□□□□ -0.52
PRKN-205ENST00000366897 SLC16A14Q7RTX9 510 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 FBXL14Q8N1E6 418 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 COMMD1Q8N668 190 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 PRSS33Q8NF86 280 aa11.79□□□□□ -0.52
PRKN-205ENST00000366897 ZNF501Q96CX3 271 aaPredicted RBP11.79□□□□□ -0.52
PRKN-205ENST00000366897 CXorf65A6NEN9 183 aa11.78□□□□□ -0.52
PRKN-205ENST00000366897 RBFOX3A6NFN3 312 aa11.78□□□□□ -0.52
PRKN-205ENST00000366897 AADACP22760 399 aa11.78□□□□□ -0.52
PRKN-205ENST00000366897 S100A2P29034 98 aa11.78□□□□□ -0.52
PRKN-205ENST00000366897 AFF3P51826 1226 aaKnown RBP11.78□□□□□ -0.52
PRKN-205ENST00000366897 DLK1P80370 383 aa11.78□□□□□ -0.52
PRKN-205ENST00000366897 PPA1Q15181 289 aa11.78□□□□□ -0.52
PRKN-205ENST00000366897 SPSB3Q6PJ21 355 aa11.78□□□□□ -0.52
PRKN-205ENST00000366897 D2HGDHQ8N465 521 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms