RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MTCP1P56278 107 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 PDZK1IP1Q13113 114 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ALKBH1Q13686 389 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ZNF626Q68DY1 528 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ZNF782Q6ZMW2 699 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 CCDC121Q6ZUS5 278 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 LHFPL2Q6ZUX7 228 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 GDPD3Q7L5L3 318 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 FAM58AQ8N1B3 248 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 SYS1Q8N2H4 156 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 EMG1Q92979 244 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 SPSB1Q96BD6 273 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 C4orf36Q96KX1 117 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 C9orf16Q9BUW7 83 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ISG20L2Q9H9L3 353 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 HHLA2Q9UM44 414 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 MYRFQ9Y2G1 1151 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 GMPPBQ9Y5P6 360 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 TGP01266 2768 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 SNTNA6NMZ2 147 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 M0QZ24 198 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 CHST1O43916 411 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 KDM4BO94953 1096 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 INMTO95050 263 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ALX3O95076 343 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 COX7A1P24310 79 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 LMO1P25800 156 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ERP29P30040 261 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 EFNB2P52799 333 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 EDDM3BP56851 147 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ACTA2P62736 377 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ACTG2P63267 376 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 LY6EQ16553 131 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 SPIN3Q5JUX0 258 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 LHFPL3Q86UP9 236 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 C10orf67Q8IYJ2 551 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 OR4S1Q8NGB4 309 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 MALSU1Q96EH3 234 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 OPALINQ96PE5 141 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ALG8Q9BVK2 526 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 MMP27Q9H306 513 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 TCF7L1Q9HCS4 588 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 S100A14Q9HCY8 104 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 HMG20AQ9NP66 347 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 TBL2Q9Y4P3 447 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 LINC00312Q9Y6C7 94 aa11.06□□□□□ -0.64
TNFRSF1A-202ENST00000366159 MEX3AA1L020 520 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 E9PI62 339 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 MPZL2O60487 215 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ZNF20P17024 532 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 PEX2P28328 305 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 DUSP1P28562 367 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 OR3A1P47881 315 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 LGALS4P56470 323 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 CCBE1Q6UXH8 406 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 LIAT1Q6ZQX7 453 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 TPRX1Q8N7U7 411 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 OR13D1Q8NGV5 346 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 APH1BQ8WW43 257 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ZNF714Q96N38 554 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 CDCA4Q9BXL8 241 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 CHST6Q9GZX3 395 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 COMMD4Q9H0A8 199 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 RANBP3Q9H6Z4 567 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 INPP5EQ9NRR6 644 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 FAM118AQ9NWS6 357 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ERVK13-1Q9NX77 482 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 SIGLEC9Q9Y336 463 aa11.05□□□□□ -0.64
TNFRSF1A-202ENST00000366159 LOC100130705A0A1B0GUX0 176 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 hADV38S2A0JD32 116 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 MGST3O14880 152 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ZFPL1O95159 310 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 CALCBP10092 127 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 GABRA5P31644 462 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 POU3F4P49335 361 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 DYNLT3P51808 116 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 RAB40BQ12829 278 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 GRK1Q15835 563 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ZNF529Q6P280 563 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ZBTB49Q6ZSB9 765 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 SAXO1Q8IYX7 474 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 PQLC1Q8N2U9 271 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 PARP16Q8N5Y8 322 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 OR13C3Q8NGS6 347 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 CFHR4Q92496 578 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 CORO2AQ92828 525 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 Q96MT0 163 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 SPACA5Q96QH8 159 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 JAM3Q9BX67 310 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ZCCHC4Q9H5U6 513 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 RHOFQ9HBH0 211 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 AMBNQ9NP70 447 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 RAB18Q9NP72 206 aa11.04□□□□□ -0.64
TNFRSF1A-202ENST00000366159 A6NDX4 124 aa11.03□□□□□ -0.64
TNFRSF1A-202ENST00000366159 MMP23AO75900 390 aa11.03□□□□□ -0.64
TNFRSF1A-202ENST00000366159 TSPAN15O95858 294 aa11.03□□□□□ -0.64
TNFRSF1A-202ENST00000366159 FADS2O95864 444 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1A-202ENST00000366159 OR2H2O95918 312 aa11.03□□□□□ -0.64
TNFRSF1A-202ENST00000366159 CYB5AP00167 134 aa11.03□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ARG1P05089 322 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms