RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 ZNF3P17036 446 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 FOXN2P32314 431 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 PFN2P35080 140 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 BMI1P35226 326 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 SPINT3P49223 89 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 WDR43Q15061 677 aaKnown RBP eCLIP-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 MOGQ16653 247 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 PDK4Q16654 411 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 LINC00303Q3SY05 128 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 HSP90AB3PQ58FF7 597 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 CT45A1Q5HYN5 189 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 ETFRF1Q6IPR1 90 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 BLOC1S2Q6QNY1 142 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 LINC00575Q6W349 94 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 SCGB1D4Q6XE38 83 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 FAM231DQ6ZW35 169 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 ERASQ7Z444 233 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 DPPA2Q7Z7J5 298 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 SLC38A6Q8IZM9 456 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 CLECL1Q8IZS7 167 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 CENPLQ8N0S6 344 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 BBS5Q8N3I7 341 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 LINC00471Q8N535 108 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 YIPF7Q8N8F6 280 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 FAM83FQ8NEG4 500 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 PXT1Q8NFP0 134 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 OR1M1Q8NGA1 313 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 CT45A3Q8NHU0 189 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 NRBF2Q96F24 287 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 PLEKHA8Q96JA3 519 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 ZBTB18Q99592 522 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 TSNAXQ99598 290 aaKnown RBP-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 ANKRD60Q9BZ19 345 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 ZNF436Q9C0F3 470 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 SRRQ9GZT4 340 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 NMRAL1Q9HBL8 299 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 PXMP2Q9NR77 195 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 RCL1Q9Y2P8 373 aaKnown RBP-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 ENPP4Q9Y6X5 453 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 COMMD3-BMI1R4GMX3 469 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 LAMA3Q16787 3333 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 DOCK3Q8IZD9 2030 aa-1.06□□□□□ -2.58
RNU6-54P-201ENST00000365563 MGAM2Q2M2H8 2515 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 DHX29Q7Z478 1369 aaKnown RBP-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 TRIM64A6NGJ6 449 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 OR5H14A6NHG9 310 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 TRIM64BA6NI03 449 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 C11orf86A6NJI1 115 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 M0R2N4 97 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 MYL12BO14950 172 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 PSTPIP1O43586 416 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 SLC37A4O43826 429 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 NOS1APO75052 506 aaPredicted RBP-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 CLPXO76031 633 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 OR2A4O95047 310 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 CLIC3O95833 236 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 MBD3O95983 291 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 IGLV3-1P01715 115 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 CRYGDP07320 174 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 RNASE3P12724 160 aaKnown RBP-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 CYP2F1P24903 491 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 HTR2AP28223 471 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 SFNP31947 248 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 IFNA8P32881 189 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 GGT2P36268 569 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 CASP2P42575 452 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 CEBPDP49716 269 aaPredicted RBP-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 MRPS22P82650 360 aaKnown RBP-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 TMEM241Q24JQ0 296 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 ARHGAP11BQ3KRB8 267 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 FAM229BQ4G0N7 80 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 TMEM41BQ5BJD5 291 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 PPM1LQ5SGD2 360 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 TMEM236Q5W0B7 351 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 OR10K2Q6IF99 312 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 KDELC1Q6UW63 502 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 SDIM1Q6ZPB5 146 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 SLC35E3Q7Z769 313 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 LYG2Q86SG7 212 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 LSMEM1Q8N8F7 131 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 FER1L6-AS1Q8NA97 138 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 MFSD9Q8NBP5 474 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 TRPV1Q8NER1 839 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 OR51T1Q8NGJ9 327 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 SLC7A13Q8TCU3 470 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 TCP10LQ8TDR4 215 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 CMBLQ96DG6 245 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 TCEANC2Q96MN5 208 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 OR2A7Q96R45 310 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 BCL2L14Q9BZR8 327 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 TSGA10Q9BZW7 698 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 C16orf95Q9H693 158 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 MEAF6Q9HAF1 191 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 HEBP1Q9NRV9 189 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 CISHQ9NSE2 258 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 RBFOX1Q9NWB1 397 aaKnown RBP-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 PIGLQ9Y2B2 252 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 AP3M1Q9Y2T2 418 aa-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 STRAPQ9Y3F4 350 aaKnown RBP-1.07□□□□□ -2.58
RNU6-54P-201ENST00000365563 LINC00588Q9Y4M8 146 aa-1.07□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms