RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 IGKV3D-15A0A087WSY6 115 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 IGKV3-15P01624 115 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 PTTG1IPP53801 180 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 PPP1R1CQ8WVI7 109 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 ZNF488Q96MN9 340 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 TGIF2Q9GZN2 237 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 DCAF16Q9NXF7 216 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 CLN8Q9UBY8 286 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 CCDC88CQ9P219 2028 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 PYCARD-AS1I3L0S3 204 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 CABLES2Q9BTV7 478 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 SLC24A4Q8NFF2 622 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 RREB1Q92766 1687 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 ARAP2Q8WZ64 1704 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 AMTP48728 403 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 FAM219AQ8IW50 185 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 TPRX1Q8N7U7 411 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 GEMIN2O14893 280 aaKnown RBP17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 FGF2P09038 288 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 PEBP1P30086 187 aaKnown RBP17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 P2RX4Q99571 388 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 C12orf10Q9HB07 376 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 ASCL3Q9NQ33 180 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 CACNG5Q9UF02 275 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 GPR6P46095 362 aaPredicted RBP17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 CALHM3Q86XJ0 350 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 H7BYZ3 331 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 TMEM74BQ9NUR3 256 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 RNF7Q9UBF6 113 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 MDC1Q14676 2089 aaKnown RBP17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 UNC13CQ8NB66 2214 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 C3orf85A0A1B0GTC6 90 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 CGB1A6NKQ9 187 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 SEMA7AO75326 666 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 JTBO76095 146 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 CLDN20P56880 219 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 LINC00303Q3SY05 128 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 RBPMS2Q6ZRY4 209 aaKnown RBP17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 OR10Z1Q8NGY1 313 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 SPSB1Q96BD6 273 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 LRP5O75197 1615 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 MGPP08493 103 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 RAB7AP51149 207 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 DPH3Q96FX2 82 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 OR2J1Q9GZK6 312 aa17.9■□□□□ 0.46
CDC42BPB-201ENST00000361246 RD3LP0DJH9 198 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 MRPS11P82912 194 aaKnown RBP17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 ZAR1Q86SH2 424 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 FLYWCH2Q96CP2 140 aaKnown RBP17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 IGLV3-16A0A075B6K0 115 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 PIGYQ3MUY2 71 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 PRSS42Q7Z5A4 293 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 C9orf40Q8IXQ3 194 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 DTX4Q9Y2E6 619 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 G6PCP35575 357 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 OR10A7Q8NGE5 316 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 GNPNAT1Q96EK6 184 aaPredicted RBP17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 PERPQ96FX8 193 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 PARP11Q9NR21 331 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 OR6C3Q9NZP0 311 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 RFPL4AA6NLU0 287 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 RFPL4AL1F8VTS6 287 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 GPR35Q9HC97 309 aa17.89■□□□□ 0.45
CDC42BPB-201ENST00000361246 SLC25A10Q9UBX3 287 aaPredicted RBP17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 GNG7O60262 68 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 OR5AC1P0C628 307 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 IGFBP7Q16270 282 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 PTP4A1Q93096 173 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 WDR89Q96FK6 387 aaPredicted RBP17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 KPTNQ9Y664 436 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 COL10A1Q03692 680 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 CD276Q5ZPR3 534 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 OR4D10Q8NGI6 311 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 SERPINE3A8MV23 424 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 UCNP55089 124 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 RBPMSQ93062 196 aaKnown RBP17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 MOSPD3O75425 235 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 ID4P47928 161 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 PAX5Q02548 391 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 ZNF665Q9H7R5 613 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 F5P12259 2224 aa17.88■□□□□ 0.45
CDC42BPB-201ENST00000361246 CDC42EP2O14613 210 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 GABRB1P18505 474 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 CD82P27701 267 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 INPP5JQ15735 1006 aaPredicted RBP17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 MS4A3Q96HJ5 214 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 A0A1W2PPQ1 181 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 TOX3O15405 576 aaPredicted RBP17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 PNPP00491 289 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 FAM87AP0C7U9 286 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 KRTDAPP60985 99 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 SIGLECL1Q8N7X8 197 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 TMEM52Q8NDY8 209 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 OR2M3Q8NG83 312 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 LINC01560Q8TB33 94 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 PRDM14Q9GZV8 571 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 WDR13Q9H1Z4 485 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 A0A1W2PN81 502 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 GATCO43716 136 aaKnown RBP17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 CHRNA7P36544 502 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms