RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 FAM78AQ5JUQ0 283 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 FAHD1Q6P587 224 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 ZNF880Q6PDB4 577 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 OR13G1Q8NGZ3 307 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 SOX21Q9Y651 276 aaPredicted RBP11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 DSCR4P56555 118 aaPredicted RBP11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 ZNF260Q3ZCT1 412 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 TRILQ7L0X0 811 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 ORAI1Q96D31 301 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 ANGPTL4Q9BY76 406 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 NAGKQ9UJ70 344 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 ALPK2Q86TB3 2170 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 FREM3P0C091 2139 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 ERVFRD-1P60508 538 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 PFN3P60673 137 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 AESQ08117 197 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 RAB32Q13637 225 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 CLLU1OSQ5K130 101 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 RAB1CQ92928 201 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 MOB4Q9Y3A3 225 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 IGSF23A1L1A6 192 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 HMX2A2RU54 273 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 LYZL6O75951 148 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 DDTP30046 118 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 HINT1P49773 126 aaPredicted RBP11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 LIM2P55344 173 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 CYB5R2Q6BCY4 276 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 PDPNQ86YL7 162 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 C9orf62Q8N4C0 152 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 C4AP0C0L4 1744 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 C4BP0C0L5 1744 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 DUSP5Q16690 384 aa11.83□□□□□ -0.51
SRGAP3-201ENST00000360413 OR10G8Q8NGN5 311 aa11.83□□□□□ -0.51
SRGAP3-201ENST00000360413 DYNLRB2Q8TF09 96 aa11.83□□□□□ -0.51
SRGAP3-201ENST00000360413 RAB37Q96AX2 223 aa11.83□□□□□ -0.51
SRGAP3-201ENST00000360413 SYT11Q9BT88 431 aa11.83□□□□□ -0.51
SRGAP3-201ENST00000360413 CORTO00230 105 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 CYR61O00622 381 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 INHBBP09529 407 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 XAF1Q6GPH4 301 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 FAM71E1Q6IPT2 247 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 ABHD17CQ6PCB6 329 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 M0R082 166 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 FAM74A3Q4VXF1 159 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 OR51M1Q9H341 326 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 DOCK1Q14185 1865 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 PNLIPRP2P54317 469 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 FBXL6Q8N531 539 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 WDFY2Q96P53 400 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 FIZ1Q96SL8 496 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 A0A1B0GV90 55 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 M0R3E3 92 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 MELTFP08582 738 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 CD40P25942 277 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 SELENOPP49908 381 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 CIRBPQ14011 172 aaKnown RBP11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 SCD5Q86SK9 330 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 D2HGDHQ8N465 521 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 GLRX2Q9NS18 164 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 PRSS37A4D1T9 235 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 MFNGO00587 321 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 NMUP48645 174 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 UFC1Q9Y3C8 167 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 HPXP02790 462 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 ZNF600Q6ZNG1 722 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 ZNF764Q96H86 408 aaPredicted RBP11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 RASL12Q9NYN1 266 aa11.83□□□□□ -0.52
SRGAP3-201ENST00000360413 ISLRO14498 428 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 HAND1O96004 215 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 CD82P27701 267 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 C1orf174Q8IYL3 243 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 ZNF384Q8TF68 577 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 SHISA7A6NL88 538 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 DNPH1O43598 174 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 PPICP45877 212 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 MYOZ3Q8TDC0 251 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 TMEM140Q9NV12 185 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 SLC25A37Q9NYZ2 338 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 SLC22A13Q9Y226 551 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 PPM1DO15297 605 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 APCSP02743 223 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 GP1BAP07359 652 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 THBS4P35443 961 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 PTGFRP43088 359 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 SLC25A42Q86VD7 318 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 LRRTM3Q86VH5 581 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 KTI12Q96EK9 354 aaPredicted RBP11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 INSM2Q96T92 566 aaPredicted RBP11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 B4E171 279 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 CRYBB2P43320 205 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 ZNF788Q6ZQV5 615 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 OR10G4Q8NGN3 311 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 OR10G9Q8NGN4 311 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 OR10G7Q8NGN6 311 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 GABRG3Q99928 467 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 C5P01031 1676 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 LOC107984156A0A0G2JMH3 177 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 MBLAC1A4D2B0 266 aaPredicted RBP11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 IGHA1P01876 353 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 IGHA2P01877 340 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms