RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 MPV17LQ2QL34 196 aa15.71■□□□□ 0.11
PDLIM7-203ENST00000359895 ZNF660Q6AZW8 331 aaPredicted RBP15.71■□□□□ 0.11
PDLIM7-203ENST00000359895 OR2A2Q6IF42 318 aa15.71■□□□□ 0.11
PDLIM7-203ENST00000359895 INO80CQ6PI98 192 aaPredicted RBP15.71■□□□□ 0.11
PDLIM7-203ENST00000359895 Q6ZT83 130 aa15.71■□□□□ 0.11
PDLIM7-203ENST00000359895 LINC00596Q86U02 117 aa15.71■□□□□ 0.11
PDLIM7-203ENST00000359895 SLC51BQ86UW2 128 aa15.71■□□□□ 0.11
PDLIM7-203ENST00000359895 SLAMF9Q96A28 289 aa15.71■□□□□ 0.11
PDLIM7-203ENST00000359895 PLK3Q9H4B4 646 aa15.71■□□□□ 0.11
PDLIM7-203ENST00000359895 ZNF442Q9H7R0 627 aa15.71■□□□□ 0.11
PDLIM7-203ENST00000359895 PLSCR2Q9NRY7 297 aa15.71■□□□□ 0.11
PDLIM7-203ENST00000359895 ZNF581Q9P0T4 197 aa15.71■□□□□ 0.11
PDLIM7-203ENST00000359895 EEF1E1-BLOC1S5C9J1V9 151 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 OR7C1O76099 320 aaPredicted RBP15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 PI3P19957 117 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 OPRM1P35372 400 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 GNG3P63215 75 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 SRSF7Q16629 238 aaKnown RBP eCLIP15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 ESCO2Q56NI9 601 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 ZNF573Q86YE8 665 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 KCNRGQ8N5I3 272 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 BOD1Q96IK1 185 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 CITED4Q96RK1 184 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 CDH20Q9HBT6 801 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 CRIM1Q9NZV1 1036 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 KIF25Q9UIL4 384 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 LHX6Q9UPM6 363 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 DOCK7Q96N67 2140 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 C13orf42A0A1B0GVH6 325 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 AHRRA9YTQ3 701 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 ZNHIT1O43257 154 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 IFNA2P01563 188 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 CRHP06850 196 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 RPS2P15880 293 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 CALCRP30988 508 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 ZNF169Q14929 603 aaPredicted RBP15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 SLC22A25Q6T423 547 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 IGFL3Q6UXB1 125 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 FBXW12Q6X9E4 464 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 ACOT7LQ6ZUV0 252 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 SCARB1Q8WTV0 552 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 PKIBQ9C010 78 aa15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 CHMP1AQ9HD42 196 aaPredicted RBP15.7■□□□□ 0.1
PDLIM7-203ENST00000359895 SPTBN2O15020 2390 aa15.69■□□□□ 0.1
PDLIM7-203ENST00000359895 LEUTXA8MZ59 168 aa15.69■□□□□ 0.1
PDLIM7-203ENST00000359895 PSMB6P28072 239 aa15.69■□□□□ 0.1
PDLIM7-203ENST00000359895 EIF2S3P41091 472 aaKnown RBP15.69■□□□□ 0.1
PDLIM7-203ENST00000359895 UBA52P62987 128 aaKnown RBP15.69■□□□□ 0.1
PDLIM7-203ENST00000359895 GABRA6Q16445 453 aa15.69■□□□□ 0.1
PDLIM7-203ENST00000359895 Q6ZS49 121 aa15.69■□□□□ 0.1
PDLIM7-203ENST00000359895 SGPP2Q8IWX5 399 aa15.69■□□□□ 0.1
PDLIM7-203ENST00000359895 GCNT2Q8N0V5 402 aa15.69■□□□□ 0.1
PDLIM7-203ENST00000359895 C1orf162Q8NEQ5 155 aaPredicted RBP15.69■□□□□ 0.1
PDLIM7-203ENST00000359895 RHOFQ9HBH0 211 aa15.69■□□□□ 0.1
PDLIM7-203ENST00000359895 C1orf123Q9NWV4 160 aa15.69■□□□□ 0.1
PDLIM7-203ENST00000359895 KANTRA0A1W2PQU2 76 aa15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 KNG1P01042 644 aa15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 RBMXP38159 391 aaKnown RBP15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 GLP1RP43220 463 aa15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 IL24Q13007 206 aa15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 ANKRD55Q3KP44 614 aa15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 LRRC37A5PQ49AS3 106 aa15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 BRICD5Q6PL45 260 aa15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 DYRK2Q92630 601 aa15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 EXTL1Q92935 676 aa15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 PIK3IP1Q96FE7 263 aa15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 SPACA1Q9HBV2 294 aa15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 RDH8Q9NYR8 311 aa15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 MTCH1Q9NZJ7 389 aa15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 RCC2Q9P258 522 aaKnown RBP15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 ZNF629Q9UEG4 869 aaPredicted RBP15.68■□□□□ 0.1
PDLIM7-203ENST00000359895 CRYM-AS1A6NIL9 109 aa15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 ZNF728P0DKX0 622 aa15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 HOXC12P31275 282 aa15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 PTGER4P35408 488 aa15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 AP2S1P53680 142 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 UCP3P55916 312 aa15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 PPP1CBP62140 327 aa15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 DAZAP2Q15038 168 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 OR2T2Q6IF00 324 aa15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 CNEP1R1Q8N9A8 125 aa15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 INO80EQ8NBZ0 244 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 BHLHE23Q8NDY6 225 aa15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 VRK1Q99986 396 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 RTL8AQ9BWD3 113 aa15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 METTL8Q9H825 291 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 CACNA1AO00555 2505 aa15.67■□□□□ 0.1
PDLIM7-203ENST00000359895 BCL2L11O43521 198 aa15.66■□□□□ 0.1
PDLIM7-203ENST00000359895 SMPD2O60906 423 aa15.66■□□□□ 0.1
PDLIM7-203ENST00000359895 LYZL6O75951 148 aa15.66■□□□□ 0.1
PDLIM7-203ENST00000359895 CBR1P16152 277 aa15.66■□□□□ 0.1
PDLIM7-203ENST00000359895 SELEP16581 610 aa15.66■□□□□ 0.1
PDLIM7-203ENST00000359895 COX5AP20674 150 aa15.66■□□□□ 0.1
PDLIM7-203ENST00000359895 IL32P24001 234 aa15.66■□□□□ 0.1
PDLIM7-203ENST00000359895 KIR2DL2P43627 348 aaPredicted RBP15.66■□□□□ 0.1
PDLIM7-203ENST00000359895 IL13RA2Q14627 380 aa15.66■□□□□ 0.1
PDLIM7-203ENST00000359895 ACSF3Q4G176 576 aaPredicted RBP15.66■□□□□ 0.1
PDLIM7-203ENST00000359895 HAGHLQ6PII5 290 aaPredicted RBP15.66■□□□□ 0.1
PDLIM7-203ENST00000359895 C9orf106Q8NAJ2 232 aa15.66■□□□□ 0.1
PDLIM7-203ENST00000359895 OR5M9Q8NGP3 310 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms