RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ETV3LQ6ZN32 361 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 P4HA3Q7Z4N8 544 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 MYPOPQ86VE0 399 aaPredicted RBP10.95□□□□□ -0.66
GGPS1-202ENST00000358966 OR56B4Q8NH76 319 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 SNIP1Q8TAD8 396 aaKnown RBP10.95□□□□□ -0.66
GGPS1-202ENST00000358966 RAB3CQ96E17 227 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 SIRT7Q9NRC8 400 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 C19orf12Q9NSK7 152 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 PROB1E7EW31 1015 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 AP4M1O00189 453 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 FARS2O95363 451 aaKnown RBP10.95□□□□□ -0.66
GGPS1-202ENST00000358966 IFNA10P01566 189 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 IGLV3-1P01715 115 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 GIPP09681 153 aaPredicted RBP10.95□□□□□ -0.66
GGPS1-202ENST00000358966 CPN1P15169 458 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 RAP2BP61225 183 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 FOXF2Q12947 444 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 SURF2Q15527 256 aaPredicted RBP10.95□□□□□ -0.66
GGPS1-202ENST00000358966 IGFBP7Q16270 282 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 PCGF3Q3KNV8 242 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 C1orf100Q5SVJ3 147 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 MOB3CQ70IA8 216 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 RPRMLQ8N4K4 120 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 NKAIN3Q8N8D7 197 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 PARPBPQ9NWS1 579 aa10.95□□□□□ -0.66
GGPS1-202ENST00000358966 LYZL6O75951 148 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 NGFP01138 241 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 SNRPCP09234 159 aaKnown RBP10.94□□□□□ -0.66
GGPS1-202ENST00000358966 RAG2P55895 527 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 NHLH2Q02577 135 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 RNPS1Q15287 305 aaKnown RBP10.94□□□□□ -0.66
GGPS1-202ENST00000358966 VWA1Q6PCB0 445 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 SPNS3Q6ZMD2 512 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 ZNF584Q8IVC4 421 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 HIST1H2BAQ96A08 127 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 EGLN1Q9GZT9 426 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 HRASLSQ9HDD0 168 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 NPDC1Q9NQX5 325 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-202ENST00000358966 ZNF581Q9P0T4 197 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 MRPS28Q9Y2Q9 187 aaKnown RBP10.94□□□□□ -0.66
GGPS1-202ENST00000358966 CARHSP1Q9Y2V2 147 aaKnown RBP10.94□□□□□ -0.66
GGPS1-202ENST00000358966 COL12A1Q99715 3063 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 A0A0A6YYD4 124 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 MEGF11A6BM72 1044 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 ZNF724A8MTY0 619 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 ANGPTL7O43827 346 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 CRTAPO75718 401 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-202ENST00000358966 RAD51DO75771 328 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 CEACAM4O75871 244 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 SNAPC5O75971 98 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 MPIG6BO95866 241 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 GNB3P16520 340 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 ZNF25P17030 456 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-202ENST00000358966 GAMTQ14353 236 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 KISS1Q15726 138 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 ZNF585AQ6P3V2 769 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 CHST4Q8NCG5 386 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 BHLHE23Q8NDY6 225 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 OR1S2Q8NGQ3 325 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 NUDCD2Q8WVJ2 157 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 C1orf147Q96MC9 270 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-202ENST00000358966 C20orf85Q9H1P6 137 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 OR10A2Q9H208 303 aa10.94□□□□□ -0.66
GGPS1-202ENST00000358966 ELL3Q9HB65 397 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-202ENST00000358966 A0A0U1RQV5 110 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 FAM230AA0A1W2PPH8 454 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 C3orf80F5H4A9 247 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 GSTZ1O43708 216 aaPredicted RBP10.93□□□□□ -0.66
GGPS1-202ENST00000358966 SOX15O60248 233 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 CELA3BP08861 270 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 FCGR2AP12318 317 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 RCC1P18754 421 aaPredicted RBP10.93□□□□□ -0.66
GGPS1-202ENST00000358966 CFPP27918 469 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 PKIAP61925 76 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 RAB1AP62820 205 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 QRFPP83859 136 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 ESPL1Q14674 2120 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 DRAM2Q6UX65 266 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 GVQW1Q8N7I0 195 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 C9orf106Q8NAJ2 232 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 OR4S1Q8NGB4 309 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 HMSDA8MTL9 139 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 TSTD3H0UI37 97 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 RAB27BO00194 218 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 CTDSPLO15194 276 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 SPRY1O43609 319 aaPredicted RBP10.93□□□□□ -0.66
GGPS1-202ENST00000358966 YIF1AO95070 293 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 IGHG3P01860 377 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 CSN2P05814 226 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 RAB5CP51148 216 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 SRSF3P84103 164 aaKnown RBP10.93□□□□□ -0.66
GGPS1-202ENST00000358966 C10orf91Q5T1B1 145 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 ZADH2Q8N4Q0 377 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 POFUT1Q9H488 388 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 ZNF71Q9NQZ8 489 aaPredicted RBP10.93□□□□□ -0.66
GGPS1-202ENST00000358966 GOLT1BQ9Y3E0 138 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 V9GYS6 101 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 ITPR1Q14643 2758 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 IGKV1-27A0A075B6S5 117 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 SERPINA2P20848 420 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms