RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 PGLYRP3Q96LB9 341 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 TRAV20A0A0B4J274 112 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 TMEM30CPA0ZSE6 113 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 VSIG10L2P0DP72 767 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 CXCL2P19875 107 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 MFRPQ9BY79 579 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 SHANK3Q9BYB0 1731 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 COL11A1P12107 1806 aaPredicted RBP12.12□□□□□ -0.47
VCP-201ENST00000358901 TRGV5A0A0B4J1U4 118 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 M0R1B8 84 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 M0R1X1 148 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 EPHA8P29322 1005 aaPredicted RBP12.11□□□□□ -0.47
VCP-201ENST00000358901 SURF2Q15527 256 aaPredicted RBP12.11□□□□□ -0.47
VCP-201ENST00000358901 C1QTNF12Q5T7M4 302 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 ADAT1Q9BUB4 502 aaKnown RBP12.11□□□□□ -0.47
VCP-201ENST00000358901 MRPS18BQ9Y676 258 aaKnown RBP12.11□□□□□ -0.47
VCP-201ENST00000358901 RIF1Q5UIP0 2472 aaKnown RBP12.11□□□□□ -0.47
VCP-201ENST00000358901 C4orf51C9J302 202 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 LINC01387J3KSC0 135 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 FABP4P15090 132 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 SRD5A2P31213 254 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 LGALS4P56470 323 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 LSM6P62312 80 aaKnown RBP12.11□□□□□ -0.47
VCP-201ENST00000358901 OR10X1Q8NGY0 326 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 MRPL24Q96A35 216 aaKnown RBP12.11□□□□□ -0.47
VCP-201ENST00000358901 NMES1Q9C002 83 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 LPAR3Q9UBY5 353 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 PILRAQ9UKJ1 303 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 MAP1LC3B2A6NCE7 125 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 GEMIN2O14893 280 aaKnown RBP12.11□□□□□ -0.47
VCP-201ENST00000358901 RTL8BQ17RB0 113 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 MRPS24Q96EL2 167 aaKnown RBP12.11□□□□□ -0.47
VCP-201ENST00000358901 TAAR6Q96RI8 345 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 AMELYQ99218 206 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 MAP1LC3BQ9GZQ8 125 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 PPP1R14DQ9NXH3 145 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 CDRT15L2A8MXV6 281 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 ZNF17P17021 662 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 CRYBA2P53672 197 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 ALKBH6Q3KRA9 238 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 FAM209AQ5JX71 171 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 TM4SF19Q96DZ7 209 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 FAM103A1Q9BTL3 118 aaKnown RBP12.11□□□□□ -0.47
VCP-201ENST00000358901 TAAR3PQ9P1P4 343 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 KCNE5Q9UJ90 142 aa12.11□□□□□ -0.47
VCP-201ENST00000358901 TDRD6O60522 2096 aaKnown RBP12.1□□□□□ -0.47
VCP-201ENST00000358901 CFDP00746 253 aaPredicted RBP12.1□□□□□ -0.47
VCP-201ENST00000358901 NMBP08949 121 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 POU2F2P09086 479 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 CHRNB4P30926 498 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 ERHP84090 104 aaKnown RBP12.1□□□□□ -0.47
VCP-201ENST00000358901 SLC38A11Q08AI6 406 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 GGTLC2Q14390 218 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 UBALD2Q8IYN6 164 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 D2HGDHQ8N465 521 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 UCN2Q96RP3 112 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 ZNF107Q9UII5 783 aaPredicted RBP12.1□□□□□ -0.47
VCP-201ENST00000358901 ZMIZ1Q9ULJ6 1067 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 YIF1AO95070 293 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 CALCRP30988 508 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 LPAR6P43657 344 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 AWAT1Q58HT5 328 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 PRR27Q6MZM9 219 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 ALX4Q9H161 411 aaPredicted RBP12.1□□□□□ -0.47
VCP-201ENST00000358901 GPR27Q9NS67 375 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 ZNF586Q9NXT0 402 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 SHISA7A6NL88 538 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 DEFB108AA8MXU0 73 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 DMWDQ09019 674 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 Q8IYB0 196 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 KDF1Q8NAX2 398 aaPredicted RBP12.1□□□□□ -0.47
VCP-201ENST00000358901 KISS1RQ969F8 398 aaPredicted RBP12.1□□□□□ -0.47
VCP-201ENST00000358901 ZNF251Q9BRH9 671 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 FSCN3Q9NQT6 498 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 TET1Q8NFU7 2136 aa12.1□□□□□ -0.47
VCP-201ENST00000358901 A0A1W2PPC1 479 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 KCNAB3O43448 404 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 ASAH2BP0C7U1 165 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 SLC16A13Q7RTY0 426 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 STPG2Q8N412 459 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 SLC25A38Q96DW6 304 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 ZPBPQ9BS86 351 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.09□□□□□ -0.47
VCP-201ENST00000358901 VSIG4Q9Y279 399 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 ATP23Q9Y6H3 246 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 C5orf67F2Z3F1 127 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 PRRG2O14669 202 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 GAB4Q2WGN9 574 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 SMIM15Q7Z3B0 74 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 WFDC8Q8IUA0 241 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 SIGLECL1Q8N7X8 197 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 TAAR9Q96RI9 348 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 RSRP1Q9BUV0 290 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 UCK1Q9HA47 277 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 SLC2A9Q9NRM0 540 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 CACNA1GO43497 2377 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 TTRP02766 147 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 CD200P41217 278 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 GNB1P62873 340 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 FFAR4Q5NUL3 377 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms