RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 OR2AE1Q8NHA4 323 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 ADAT3Q96EY9 351 aaPredicted RBP10.86□□□□□ -0.67
COLCA1-201ENST00000355430 ZNF107Q9UII5 783 aaPredicted RBP10.86□□□□□ -0.67
COLCA1-201ENST00000355430 SH2D1BO14796 132 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 PPIHO43447 177 aaKnown RBP10.86□□□□□ -0.67
COLCA1-201ENST00000355430 CST7O76096 145 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 TAS2R30P59541 319 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 C4orf17Q53FE4 359 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 C1orf185Q5T7R7 199 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 SLC39A7Q92504 469 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 RDH5Q92781 318 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 PIK3IP1Q96FE7 263 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 TECTBQ96PL2 329 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 NPDC1Q9NQX5 325 aaPredicted RBP10.86□□□□□ -0.67
COLCA1-201ENST00000355430 CNTRLQ7Z7A1 2325 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 SMIM10L1P0DMW3 83 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 MEOX2P50222 304 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 LIMK1P53667 647 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 ZNF441Q8N8Z8 693 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 NECAP1Q8NC96 275 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 TET1Q8NFU7 2136 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 MARVELD3Q96A59 401 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 SMIM10Q96HG1 83 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 CTSBP07858 339 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 CTRB1P17538 263 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 PSMB3P49720 205 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 TMEM33P57088 247 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 HTD2P86397 168 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 CTRB2Q6GPI1 263 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 TRBV5-7A0A0A0MS05 114 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 LOC105371267A0A1B0GV96 52 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 PRR19A6NJB7 356 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 FAM74A7A6NL05 159 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 A8MXE2 369 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 C17orf112F2Z3M2 114 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 CDK2AP1O14519 115 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 APOA2P02652 100 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 PRSS12P56730 875 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 RNF212Q495C1 297 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 FAM74A3Q4VXF1 159 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 SLC16A13Q7RTY0 426 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 C9orf40Q8IXQ3 194 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 FAM24BQ8N5W8 94 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 GPX7Q96SL4 187 aaPredicted RBP10.85□□□□□ -0.67
COLCA1-201ENST00000355430 SLC26A1Q9H2B4 701 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 PLEKHF2Q9H8W4 249 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 GCM1Q9NP62 436 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 ZNF646O15015 1829 aaPredicted RBP10.85□□□□□ -0.67
COLCA1-201ENST00000355430 H3BMH7 237 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 OR5AC1P0C628 307 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 IL11P20809 199 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 MT-CO2P00403 227 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 HAAOP46952 286 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 GAS1P54826 345 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 SSX2Q16385 188 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 LRRC10Q5BKY1 277 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 DMBX1Q8NFW5 382 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 SLC26A10Q8NG04 563 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 ZNRF4Q8WWF5 429 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 SEC11CQ9BY50 192 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 KIAA1456Q9P272 454 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 RP1L1Q8IWN7 2480 aaPredicted RBP10.85□□□□□ -0.67
COLCA1-201ENST00000355430 SCN2AQ99250 2005 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 H3BP45 60 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 LMX1BO60663 402 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 PDLIM3Q53GG5 364 aaPredicted RBP10.85□□□□□ -0.67
COLCA1-201ENST00000355430 SPANXN5Q5MJ07 72 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 TMEM104Q8NE00 496 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 RGP1Q92546 391 aaPredicted RBP10.85□□□□□ -0.67
COLCA1-201ENST00000355430 RAB1CQ92928 201 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 MRPS24Q96EL2 167 aaKnown RBP10.85□□□□□ -0.67
COLCA1-201ENST00000355430 LPAR3Q9UBY5 353 aa10.85□□□□□ -0.67
COLCA1-201ENST00000355430 TRAV20A0A0B4J274 112 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 SPRY3O43610 288 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 WDR1O75083 606 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 PNPP00491 289 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 MT-ND4LP03901 98 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 CTXN2P0C2S0 81 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 MGAT2Q10469 447 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 GUCA2BQ16661 112 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 ZNF787Q6DD87 383 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 COMMD1Q8N668 190 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 RSRP1Q9BUV0 290 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 SHARPINQ9H0F6 387 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 IGHV3-64DA0A0J9YX35 117 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 NDUFB3O43676 98 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 GLAP06280 429 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 GSK3AP49840 483 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 FABP9Q0Z7S8 132 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 LINC01590Q5TEZ4 76 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 ZDHHC23Q8IYP9 409 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 TVP23CQ96ET8 276 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 SAT2Q96F10 170 aaPredicted RBP10.84□□□□□ -0.67
COLCA1-201ENST00000355430 NAA60Q9H7X0 242 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 IGKV1D-42A0A075B6H8 117 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 LIPT2A6NK58 231 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 FABP1P07148 127 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 GAB4Q2WGN9 574 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 SSX9Q7RTT3 188 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 OR1F12Q8NHA8 337 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms