RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 TMEM200AQ86VY9 491 aa19.21■□□□□ 0.67
NKX2-1-201ENST00000354822 CALHM1Q8IU99 346 aa19.21■□□□□ 0.67
NKX2-1-201ENST00000354822 BPIFCQ8NFQ6 507 aa19.21■□□□□ 0.67
NKX2-1-201ENST00000354822 APH1AQ96BI3 265 aa19.21■□□□□ 0.67
NKX2-1-201ENST00000354822 FER1L6-AS2Q96M78 137 aa19.21■□□□□ 0.67
NKX2-1-201ENST00000354822 SLC6A15Q9H2J7 730 aa19.21■□□□□ 0.67
NKX2-1-201ENST00000354822 KLF13Q9Y2Y9 288 aaPredicted RBP19.21■□□□□ 0.67
NKX2-1-201ENST00000354822 PQLC2LA1A4F0 135 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 FCGR2CP31995 323 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 GLP1RP43220 463 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 GGNBP1Q5YKI7 109 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 DHRS13Q6UX07 377 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 LINC00696Q6ZRV3 163 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 NAXEQ8NCW5 288 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 RTN4IP1Q8WWV3 396 aaPredicted RBP19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 TOMM40LQ969M1 308 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 ZNF442Q9H7R0 627 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 ASF1BQ9NVP2 202 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 PLA2G3Q9NZ20 509 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 A0A096LPE4 126 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 A0A1W2PPZ6 126 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 CST4P01036 141 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 CCNOP22674 350 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 BRICD5Q6PL45 260 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 LRTM2Q8N967 370 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 OR56B2PQ8NGI1 322 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 ARL11Q969Q4 196 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 PAPOLGQ9BWT3 736 aaKnown RBP19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 STARD10Q9Y365 291 aa19.2■□□□□ 0.66
NKX2-1-201ENST00000354822 C5orf49A4QMS7 147 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 KLRC4-KLRK1H3BQV0 150 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 HKR1P10072 659 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 MRPL21Q7Z2W9 205 aaKnown RBP19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 SPERTQ8NA61 448 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 TMED6Q8WW62 240 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 MOB3AQ96BX8 217 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 OPA3Q9H6K4 179 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 ZC4H2Q9NQZ6 224 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 PLSCR2Q9NRY7 297 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 ZFP57Q9NU63 452 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 DEDDO75618 318 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 OR7C1O76099 320 aaPredicted RBP19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 HLA-HP01893 362 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 SP1P08047 785 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 PRDX4Q13162 271 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 TMEM187Q14656 261 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 SRSF7Q16629 238 aaKnown RBP eCLIP19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 CEACAM21Q3KPI0 293 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 HES3Q5TGS1 186 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 LHFPL5Q8TAF8 219 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 DYRK2Q92630 601 aa19.19■□□□□ 0.66
NKX2-1-201ENST00000354822 K7EPK0 472 aa19.18■□□□□ 0.66
NKX2-1-201ENST00000354822 ACTL6AO96019 429 aa19.18■□□□□ 0.66
NKX2-1-201ENST00000354822 FAM157CP0CG43 387 aa19.18■□□□□ 0.66
NKX2-1-201ENST00000354822 PLP2Q04941 152 aa19.18■□□□□ 0.66
NKX2-1-201ENST00000354822 C9orf135Q5VTT2 229 aa19.18■□□□□ 0.66
NKX2-1-201ENST00000354822 Q6ZS49 121 aa19.18■□□□□ 0.66
NKX2-1-201ENST00000354822 MCEMP1Q8IX19 187 aa19.18■□□□□ 0.66
NKX2-1-201ENST00000354822 FAM71E2Q8N5Q1 922 aa19.18■□□□□ 0.66
NKX2-1-201ENST00000354822 CCDC71LQ8N9Z2 235 aa19.18■□□□□ 0.66
NKX2-1-201ENST00000354822 SAT2Q96F10 170 aaPredicted RBP19.18■□□□□ 0.66
NKX2-1-201ENST00000354822 MARS2Q96GW9 593 aaKnown RBP19.18■□□□□ 0.66
NKX2-1-201ENST00000354822 MS4A7Q9GZW8 240 aaPredicted RBP19.18■□□□□ 0.66
NKX2-1-201ENST00000354822 FAM86C1Q9NVL1 165 aa19.18■□□□□ 0.66
NKX2-1-201ENST00000354822 NME2P1O60361 137 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 NME2P22392 152 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 RPL12P30050 165 aaKnown RBP19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 PXDC1Q5TGL8 231 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 ZDHHC23Q8IYP9 409 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 MRPL24Q96A35 216 aaKnown RBP19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 PLEKHA2Q9HB19 425 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 SLC2A9Q9NRM0 540 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 KMT2EQ8IZD2 1858 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 FAM221AA4D161 298 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 TSPAN4O14817 238 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 NPBWR2P48146 333 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 FXYD4P59646 89 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 RAB1AP62820 205 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 DPPA2Q7Z7J5 298 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 PRRX2Q99811 253 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 GPR179Q6PRD1 2367 aa19.17■□□□□ 0.66
NKX2-1-201ENST00000354822 OR5AC1P0C628 307 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 MEOX1P50221 254 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 HERV-K104P61576 105 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 SLC10A1Q14973 349 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 LIAT1Q6ZQX7 453 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 FOXRED2Q8IWF2 684 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 MKXQ8IYA7 352 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 NARS2Q96I59 477 aaKnown RBP19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 RSRP1Q9BUV0 290 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 OR2S2Q9NQN1 319 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 LPAR3Q9UBY5 353 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 NCOR1O75376 2440 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 SS18L1O75177 396 aaPredicted RBP19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 TNFSF15O95150 251 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 FGF12P61328 243 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 ZNF273Q14593 569 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 LGI3Q8N145 548 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 OR5A2Q8NGI9 324 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 LRRC46Q96FV0 321 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms