RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 CMBLQ96DG6 245 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 ITCHQ96J02 903 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 TECTBQ96PL2 329 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 OR2H1Q9GZK4 316 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 GCM1Q9NP62 436 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 AURKAIP1Q9NWT8 199 aaPredicted RBP9.29□□□□□ -0.92
RTN3-204ENST00000354497 ANGPT4Q9Y264 503 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 A0A0U1RQK1 487 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 CENPVL3A0A0U1RRI6 287 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 BTBD17A6NE02 478 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 CPSF4LA6NMK7 179 aaKnown RBP9.28□□□□□ -0.92
RTN3-204ENST00000354497 PRAF2O60831 178 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 WBP4O75554 376 aaKnown RBP9.28□□□□□ -0.92
RTN3-204ENST00000354497 CLUP10909 449 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 PIPP12273 146 aaPredicted RBP9.28□□□□□ -0.92
RTN3-204ENST00000354497 AQP1P29972 269 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 SDC2P34741 201 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 GRK5P34947 590 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 CFHR2P36980 270 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 MRPS34P82930 218 aaKnown RBP9.28□□□□□ -0.92
RTN3-204ENST00000354497 FMODQ06828 376 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 SLC35D3Q5M8T2 416 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 FAM201AQ5SY85 155 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 GCNT6Q5T4J0 391 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 C11orf87Q6NUJ2 197 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 C1orf94Q6P1W5 598 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 LYPD2Q6UXB3 125 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 MOGAT3Q86VF5 341 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 LNX2Q8N448 690 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 ZSCAN4Q8NAM6 433 aaPredicted RBP9.28□□□□□ -0.92
RTN3-204ENST00000354497 NPEPL1Q8NDH3 523 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 OR11H7Q8NGC8 314 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 OR10AD1Q8NGE0 317 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 OR8J3Q8NGG0 315 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 OR1S1Q8NH92 325 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 MOSPD2Q8NHP6 518 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 LHX4Q969G2 390 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 PPP1R14AQ96A00 147 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 NABP1Q96AH0 204 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 HRASLS5Q96KN8 279 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 MCHR1Q99705 422 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 WFDC6Q9BQY6 131 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 C16orf95Q9H693 158 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 NECAP2Q9NVZ3 263 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 KCNIP3Q9Y2W7 256 aa9.28□□□□□ -0.92
RTN3-204ENST00000354497 IGHV1-69DA0A0B4J2H0 117 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 LRRC30A6NM36 301 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 C1orf196B1AJZ1 125 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 ZNF879B4DU55 563 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 C22orf46C9J442 243 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 IFNL4K9M1U5 179 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 M0QZK8 103 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 M0R3H8 397 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 CLIC1O00299 241 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 TPST2O60704 377 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 FMO6PO60774 539 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 SLC22A3O75751 556 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 CST1P01037 141 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 IGHV1-69P01742 117 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 TSPAN19P0C672 248 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 CPT2P23786 658 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 TGFBR1P36897 503 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 IER3P46695 156 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 KCNJ3P48549 501 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 PKIAP61925 76 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 GK2Q14410 553 aaPredicted RBP9.27□□□□□ -0.93
RTN3-204ENST00000354497 HERPUD1Q15011 391 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 HIST3H3Q16695 136 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 C10orf128Q5T292 105 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 WDR25Q64LD2 544 aaPredicted RBP9.27□□□□□ -0.93
RTN3-204ENST00000354497 ANGPTL5Q86XS5 388 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 PTOV1Q86YD1 416 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 ARRDC1Q8N5I2 433 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 C15orf54Q8N8G6 183 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 OR10J5Q8NHC4 309 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 TMEM163Q8TC26 289 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 ASB10Q8WXI3 467 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 MALSU1Q96EH3 234 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 TBX15Q96SF7 602 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 ZNF607Q96SK3 696 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 GABARAPL3Q9BY60 117 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 OR51E2Q9H255 320 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 OR51J1Q9H342 316 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 DPAGT1Q9H3H5 408 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 SMURF2Q9HAU4 748 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 GHRLQ9UBU3 117 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 FAM96BQ9Y3D0 163 aa9.27□□□□□ -0.93
RTN3-204ENST00000354497 TET2Q6N021 2002 aaPredicted RBP9.26□□□□□ -0.93
RTN3-204ENST00000354497 IGKV1D-43A0A0B4J1Z2 117 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 MEX3AA1L020 520 aaKnown RBP9.26□□□□□ -0.93
RTN3-204ENST00000354497 ANKRD61A6NGH8 418 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 RGS11O94810 467 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 SCG5P05408 212 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 HCKP08631 526 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 SLC2A2P11168 524 aaPredicted RBP9.26□□□□□ -0.93
RTN3-204ENST00000354497 IRF2P14316 349 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 HIST1H1BP16401 226 aaKnown RBP9.26□□□□□ -0.93
RTN3-204ENST00000354497 NDUFB7P17568 137 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 FMO3P31513 532 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 SRP9P49458 86 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms