RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CPEB3Q8NE35 698 aaKnown RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 PXT1Q8NFP0 134 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 OR1K1Q8NGR3 316 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 CAPSLQ8WWF8 208 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 ST8SIA4Q92187 359 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 APOBEC3DQ96AK3 386 aaPredicted RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 DACT3Q96B18 629 aaPredicted RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 LRRC46Q96FV0 321 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 FAHD2AQ96GK7 314 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 BOD1Q96IK1 185 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 OR2A7Q96R45 310 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 GAL3ST1Q99999 423 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 SEC22CQ9BRL7 303 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 NICN1Q9BSH3 213 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 SELENOIQ9C0D9 397 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 ZNF436Q9C0F3 470 aaPredicted RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 TINAGL1Q9GZM7 467 aaPredicted RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 METTL9Q9H1A3 318 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 MYEF2Q9P2K5 600 aaKnown RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 ING4Q9UNL4 249 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 RYR2Q92736 4967 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 MEIS3P1A6NDR6 274 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 CEACAM18A8MTB9 384 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 H3BUI4 141 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 ATP6V1G1O75348 118 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 NRASP01111 189 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 PATE4P0C8F1 98 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 VSIG10L2P0DP72 767 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 HOXB1P14653 301 aaPredicted RBP7.01□□□□□ -1.29
CD44-205ENST00000352818 GNB3P16520 340 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 CXCL3P19876 107 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 ANXA7P20073 488 aaKnown RBP7.01□□□□□ -1.29
CD44-205ENST00000352818 RBP2P50120 134 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 FUT6P51993 359 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 TMEM50BP56557 158 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 RAP2BP61225 183 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 DHODHQ02127 395 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 ZNF92Q03936 586 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 PLAC9Q5JTB6 97 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 NSUN5P2Q63ZY6 315 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 PLXDC2Q6UX71 529 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 IDO2Q6ZQW0 420 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 C1QL2Q7Z5L3 287 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 BPIFB2Q8N4F0 458 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 ARRDC1Q8N5I2 433 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 C3orf56Q8N813 242 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 ZSCAN4Q8NAM6 433 aaPredicted RBP7.01□□□□□ -1.29
CD44-205ENST00000352818 OR51T1Q8NGJ9 327 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 OR2AE1Q8NHA4 323 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 ZNF431Q8TF32 576 aaPredicted RBP7.01□□□□□ -1.29
CD44-205ENST00000352818 NUDCD2Q8WVJ2 157 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 BCL2L2Q92843 193 aaPredicted RBP7.01□□□□□ -1.29
CD44-205ENST00000352818 CMBLQ96DG6 245 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 MRPS24Q96EL2 167 aaKnown RBP7.01□□□□□ -1.29
CD44-205ENST00000352818 PIK3IP1Q96FE7 263 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 BORCS8Q96FH0 119 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 RADILQ96JH8 1075 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 POM121L2Q96KW2 1035 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 Q96M66 194 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 S100A13Q99584 98 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 SLC6A7Q99884 636 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 BANF2Q9H503 90 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 PCDHB16Q9NRJ7 776 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 GPR173Q9NS66 373 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 ZNF222Q9UK12 451 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 HSF4Q9ULV5 492 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 SLC7A11Q9UPY5 501 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 KCNK7Q9Y2U2 307 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 HYDINQ4G0P3 5121 aa7.01□□□□□ -1.29
CD44-205ENST00000352818 DYNC2H1Q8NCM8 4307 aaKnown RBP7□□□□□ -1.29
CD44-205ENST00000352818 IGKV1-27A0A075B6S5 117 aa7□□□□□ -1.29
CD44-205ENST00000352818 LOC100509620A0A075B734 347 aa7□□□□□ -1.29
CD44-205ENST00000352818 A0A1W2PP11 408 aa7□□□□□ -1.29
CD44-205ENST00000352818 TMEM82A0PJX8 343 aa7□□□□□ -1.29
CD44-205ENST00000352818 EEF1E1-BLOC1S5C9J1V9 151 aa7□□□□□ -1.29
CD44-205ENST00000352818 M0QYG6 137 aa7□□□□□ -1.29
CD44-205ENST00000352818 OVOL3O00110 214 aa7□□□□□ -1.29
CD44-205ENST00000352818 SOCS1O15524 211 aa7□□□□□ -1.29
CD44-205ENST00000352818 RGS11O94810 467 aa7□□□□□ -1.29
CD44-205ENST00000352818 VENTXO95231 258 aa7□□□□□ -1.29
CD44-205ENST00000352818 IL18BPO95998 194 aa7□□□□□ -1.29
CD44-205ENST00000352818 CST4P01036 141 aa7□□□□□ -1.29
CD44-205ENST00000352818 IGHV3-9P01782 118 aa7□□□□□ -1.29
CD44-205ENST00000352818 HLA-HP01893 362 aa7□□□□□ -1.29
CD44-205ENST00000352818 PMELP40967 661 aa7□□□□□ -1.29
CD44-205ENST00000352818 ATP1B3P54709 279 aa7□□□□□ -1.29
CD44-205ENST00000352818 FOXG1P55316 489 aaPredicted RBP7□□□□□ -1.29
CD44-205ENST00000352818 MTCP1P56278 107 aa7□□□□□ -1.29
CD44-205ENST00000352818 TAS2R46P59540 309 aa7□□□□□ -1.29
CD44-205ENST00000352818 UBE2MP61081 183 aaKnown RBP7□□□□□ -1.29
CD44-205ENST00000352818 PLP2Q04941 152 aa7□□□□□ -1.29
CD44-205ENST00000352818 ACSF3Q4G176 576 aaPredicted RBP7□□□□□ -1.29
CD44-205ENST00000352818 SLC22A6Q4U2R8 563 aa7□□□□□ -1.29
CD44-205ENST00000352818 FAM120AOSQ5T036 256 aa7□□□□□ -1.29
CD44-205ENST00000352818 ATPAF1Q5TC12 328 aaPredicted RBP7□□□□□ -1.29
CD44-205ENST00000352818 LAMTOR1Q6IAA8 161 aa7□□□□□ -1.29
CD44-205ENST00000352818 LPCAT3Q6P1A2 487 aa7□□□□□ -1.29
CD44-205ENST00000352818 C22orf34Q6ZV56 151 aa7□□□□□ -1.29
CD44-205ENST00000352818 NLRC3Q7RTR2 1065 aa7□□□□□ -1.29
CD44-205ENST00000352818 P4HA3Q7Z4N8 544 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms