RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RAB24Q969Q5 203 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 FAM71F1Q96KD3 344 aaPredicted RBP16.29■□□□□ 0.2
SCARF1-202ENST00000348987 A0A1W2PQD3 144 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 FBLP22087 321 aaKnown RBP16.28■□□□□ 0.2
SCARF1-202ENST00000348987 ATP6V0CP27449 155 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 ARL4DP49703 201 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 C21orf62-AS1Q17RA5 79 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 TOMM40LQ969M1 308 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 PECRQ9BY49 303 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 COPS7AQ9UBW8 275 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 AK3Q9UIJ7 227 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 SCAF4O95104 1147 aaKnown RBP16.28■□□□□ 0.2
SCARF1-202ENST00000348987 TNFRSF9Q07011 255 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 FBXW12Q6X9E4 464 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 GRINAQ7Z429 371 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 SNIP1Q8TAD8 396 aaKnown RBP16.28■□□□□ 0.2
SCARF1-202ENST00000348987 KIAA1456Q9P272 454 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 OR14J1Q9UGF5 321 aa16.28■□□□□ 0.2
SCARF1-202ENST00000348987 CPAMD8Q8IZJ3 1885 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 ZNF705GA8MUZ8 300 aaPredicted RBP16.27■□□□□ 0.2
SCARF1-202ENST00000348987 LMO7DNF2Z398 122 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 MS4A18H0YCH9 400 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 AHSA1O95433 338 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 IGHMP01871 453 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 FUT3P21217 361 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 CD27P26842 260 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 MS4A18Q3C1V0 323 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 P4HA3Q7Z4N8 544 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 ZNF248Q8NDW4 579 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 PLPP5Q8NEB5 264 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 OR6X1Q8NH79 312 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 NPRL2Q8WTW4 380 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 C11orf40Q8WZ69 217 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 NOL4LQ96MY1 436 aaPredicted RBP16.27■□□□□ 0.2
SCARF1-202ENST00000348987 HDHD3Q9BSH5 251 aaPredicted RBP16.27■□□□□ 0.2
SCARF1-202ENST00000348987 LIME1Q9H400 295 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 VDAC3Q9Y277 283 aa16.27■□□□□ 0.2
SCARF1-202ENST00000348987 PHF3Q92576 2039 aaKnown RBP16.27■□□□□ 0.2
SCARF1-202ENST00000348987 FBXW4P57775 412 aa16.27■□□□□ 0.19
SCARF1-202ENST00000348987 DCAF7P61962 342 aa16.27■□□□□ 0.19
SCARF1-202ENST00000348987 DNM1P34Q6PK57 102 aa16.27■□□□□ 0.19
SCARF1-202ENST00000348987 C1orf87Q8N0U7 546 aa16.27■□□□□ 0.19
SCARF1-202ENST00000348987 FAM89BQ8N5H3 189 aa16.27■□□□□ 0.19
SCARF1-202ENST00000348987 ZNF441Q8N8Z8 693 aa16.27■□□□□ 0.19
SCARF1-202ENST00000348987 STT3BQ8TCJ2 826 aa16.27■□□□□ 0.19
SCARF1-202ENST00000348987 DDA1Q9BW61 102 aa16.27■□□□□ 0.19
SCARF1-202ENST00000348987 MCTS1Q9ULC4 181 aaKnown RBP16.27■□□□□ 0.19
SCARF1-202ENST00000348987 IGHV1OR21-1A0A087WYE8 117 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 A6NIZ1 184 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 NR2C1P13056 603 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 ZNF17P17021 662 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 RAP1BP61224 184 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 EWSR1Q01844 656 aaKnown RBP eCLIP16.26■□□□□ 0.19
SCARF1-202ENST00000348987 EMC6Q9BV81 110 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 GPR84Q9NQS5 396 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 ZNF319Q9P2F9 582 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 PITPNC1Q9UKF7 332 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 CCDC187A0A096LP49 1063 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 NPIPA5E9PKD4 350 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 DVL1O14640 695 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 ST8SIA3O43173 380 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 IL18BPO95998 194 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 DBHP09172 617 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 OMGP23515 440 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 TMEM187Q14656 261 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 C6orf201Q7Z4U5 140 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 GPR87Q9BY21 358 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 NPIPA1Q9UND3 350 aa16.26■□□□□ 0.19
SCARF1-202ENST00000348987 IGKV1-9A0A0C4DH69 117 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 FAM24AA6NFZ4 105 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 AMBPP02760 352 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 OPN1LWP04000 364 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 HOXA6P31267 233 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 HLA-DRB3P79483 266 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 OGFOD3Q6PK18 319 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 SLC35E3Q7Z769 313 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 ASB10Q8WXI3 467 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 HSPB1P04792 205 aaKnown RBP16.25■□□□□ 0.19
SCARF1-202ENST00000348987 SRFP11831 508 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 POU3F1Q03052 451 aaPredicted RBP16.25■□□□□ 0.19
SCARF1-202ENST00000348987 IL13RA2Q14627 380 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 C17orf78Q8N4C9 275 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 BEND2Q8NDZ0 799 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 KCNK17Q96T54 332 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 CHRNA10Q9GZZ6 450 aa16.25■□□□□ 0.19
SCARF1-202ENST00000348987 FOXI3A8MTJ6 420 aaPredicted RBP16.24■□□□□ 0.19
SCARF1-202ENST00000348987 H3BML4 177 aa16.24■□□□□ 0.19
SCARF1-202ENST00000348987 TMEM183AQ8IXX5 376 aa16.24■□□□□ 0.19
SCARF1-202ENST00000348987 RTN4IP1Q8WWV3 396 aaPredicted RBP16.24■□□□□ 0.19
SCARF1-202ENST00000348987 NUDT22Q9BRQ3 303 aa16.24■□□□□ 0.19
SCARF1-202ENST00000348987 PPP1R14DQ9NXH3 145 aa16.24■□□□□ 0.19
SCARF1-202ENST00000348987 SOX15O60248 233 aa16.24■□□□□ 0.19
SCARF1-202ENST00000348987 CSNK1A1P48729 337 aa16.24■□□□□ 0.19
SCARF1-202ENST00000348987 RPL23AP62750 156 aaKnown RBP16.24■□□□□ 0.19
SCARF1-202ENST00000348987 SLC10A1Q14973 349 aa16.24■□□□□ 0.19
SCARF1-202ENST00000348987 FAM189A2Q15884 450 aa16.24■□□□□ 0.19
SCARF1-202ENST00000348987 PHLDA2Q53GA4 152 aa16.24■□□□□ 0.19
SCARF1-202ENST00000348987 FBXL14Q8N1E6 418 aa16.24■□□□□ 0.19
SCARF1-202ENST00000348987 OR8B12Q8NGG6 310 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms