RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 H2AFB1P0C5Y9 115 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 VSIG10L2P0DP72 767 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 S100PP25815 95 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 APLNRP35414 380 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 RBP2P50120 134 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 BTN1A1Q13410 526 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 RBMS2Q15434 407 aaKnown RBP7.93□□□□□ -1.14
ATG4A-202ENST00000345734 Q8N1Y9 231 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 SLC30A7Q8NEW0 376 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 RBPMSQ93062 196 aaKnown RBP7.93□□□□□ -1.14
ATG4A-202ENST00000345734 SLC6A7Q99884 636 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF581Q9P0T4 197 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 DKK4Q9UBT3 224 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF629Q9UEG4 869 aaPredicted RBP7.93□□□□□ -1.14
ATG4A-202ENST00000345734 IGF2RP11717 2491 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 HEATR1Q9H583 2144 aaKnown RBP7.93□□□□□ -1.14
ATG4A-202ENST00000345734 A0A1B0GUH1 482 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 MFNGO00587 321 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 SSNA1O43805 119 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 RLN1P04808 185 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 SERPINA5P05154 406 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 TPOP07202 933 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 GABRR1P24046 479 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 BLVRBP30043 206 aaPredicted RBP7.93□□□□□ -1.14
ATG4A-202ENST00000345734 EIF2S3P41091 472 aaKnown RBP7.93□□□□□ -1.14
ATG4A-202ENST00000345734 AKR1D1P51857 326 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 FUT6P51993 359 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 PER3P56645 1201 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 MALLQ13021 153 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 RSU1Q15404 277 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 CD276Q5ZPR3 534 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 GLDNQ6ZMI3 551 aaPredicted RBP7.93□□□□□ -1.14
ATG4A-202ENST00000345734 SEM1Q6ZVN7 128 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 MRPL21Q7Z2W9 205 aaKnown RBP7.93□□□□□ -1.14
ATG4A-202ENST00000345734 BPIFB2Q8N4F0 458 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 OR52B4Q8NGK2 314 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 PAPOLGQ9BWT3 736 aaKnown RBP7.93□□□□□ -1.14
ATG4A-202ENST00000345734 TM2D1Q9BX74 207 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 FGF23Q9GZV9 251 aaPredicted RBP7.93□□□□□ -1.14
ATG4A-202ENST00000345734 CHST6Q9GZX3 395 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 METTL9Q9H1A3 318 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 NCOR1P1Q9H4R4 102 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 BIN3Q9NQY0 253 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF222Q9UK12 451 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 SLC7A11Q9UPY5 501 aa7.93□□□□□ -1.14
ATG4A-202ENST00000345734 AHRRA9YTQ3 701 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 NUPL2O15504 423 aaKnown RBP7.92□□□□□ -1.14
ATG4A-202ENST00000345734 PRAF2O60831 178 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 IFNA7P01567 189 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 S100A8P05109 93 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 HRH1P35367 487 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 NUP62P37198 522 aaPredicted RBP7.92□□□□□ -1.14
ATG4A-202ENST00000345734 RPL35P42766 123 aaKnown RBP7.92□□□□□ -1.14
ATG4A-202ENST00000345734 PRDX4Q13162 271 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 MAB21L1Q13394 359 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 GABRA6Q16445 453 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 SCGB2B2Q4G0G5 96 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 Q6ZT83 130 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 SLC36A1Q7Z2H8 476 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 DPPA2Q7Z7J5 298 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 CALHM1Q8IU99 346 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 BATF2Q8N1L9 274 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 STEAP2Q8NFT2 490 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 WBP1Q96G27 269 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 GPR137Q96N19 417 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 PECRQ9BY49 303 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 ZMAT4Q9H898 229 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 MED9Q9NWA0 146 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 NDRG3Q9UGV2 375 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF107Q9UII5 783 aaPredicted RBP7.92□□□□□ -1.14
ATG4A-202ENST00000345734 WASF3Q9UPY6 502 aa7.92□□□□□ -1.14
ATG4A-202ENST00000345734 ZZEF1O43149 2961 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 OR14I1A6ND48 311 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 PMP2P02689 132 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 SULT1A3P0DMM9 295 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 SULT1A4P0DMN0 295 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF14P17017 642 aaPredicted RBP7.91□□□□□ -1.14
ATG4A-202ENST00000345734 CPT2P23786 658 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 IDH3GP51553 393 aaPredicted RBP7.91□□□□□ -1.14
ATG4A-202ENST00000345734 ATP1B3P54709 279 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 UBE2NP61088 152 aaKnown RBP7.91□□□□□ -1.14
ATG4A-202ENST00000345734 TGFBR3Q03167 851 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 PDZK1IP1Q13113 114 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 ARFRP1Q13795 201 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 PNLIPRP3Q17RR3 467 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 SPATA46Q5T0L3 261 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 NSUN5P2Q63ZY6 315 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 RTL6Q6ICC9 239 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 TEX261Q6UWH6 196 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 ASCL4Q6XD76 172 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 C6orf201Q7Z4U5 140 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 RPRMLQ8N4K4 120 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 BHLHE23Q8NDY6 225 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 OR8H1Q8NGG4 311 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 OR13C8Q8NGS7 320 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 OR6K3Q8NGY3 331 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 HPSE2Q8WWQ2 592 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 RADILQ96JH8 1075 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 C1QTNF6Q9BXI9 259 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 UFSP2Q9NUQ7 469 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms