RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 LSM3P62310 102 aaKnown RBP10.96□□□□□ -0.65
TUBD1-202ENST00000340993 IL13RA1P78552 427 aa10.96□□□□□ -0.65
TUBD1-202ENST00000340993 EDDM3AQ14507 147 aa10.96□□□□□ -0.65
TUBD1-202ENST00000340993 GLIPR1L1Q6UWM5 242 aa10.96□□□□□ -0.65
TUBD1-202ENST00000340993 LRRTM1Q86UE6 522 aa10.96□□□□□ -0.65
TUBD1-202ENST00000340993 PDZD9Q8IXQ8 264 aa10.96□□□□□ -0.65
TUBD1-202ENST00000340993 CHCHD6Q9BRQ6 235 aa10.96□□□□□ -0.65
TUBD1-202ENST00000340993 BANF2Q9H503 90 aa10.96□□□□□ -0.65
TUBD1-202ENST00000340993 ZNF696Q9H7X3 374 aa10.96□□□□□ -0.65
TUBD1-202ENST00000340993 HES4Q9HCC6 221 aa10.96□□□□□ -0.65
TUBD1-202ENST00000340993 ZNF222Q9UK12 451 aa10.96□□□□□ -0.65
TUBD1-202ENST00000340993 FOXJ3Q9UPW0 622 aa10.96□□□□□ -0.65
TUBD1-202ENST00000340993 MRPS28Q9Y2Q9 187 aaKnown RBP10.96□□□□□ -0.65
TUBD1-202ENST00000340993 SC5DO75845 299 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 AVPP01185 164 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 UCHL1P09936 223 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 ZNF44P15621 663 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 GADD45AP24522 165 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 TGFBR1P36897 503 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 CLDN12P56749 244 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 OR10A3P58181 314 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 P2RY14Q15391 338 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 LRRC10Q5BKY1 277 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 FAM120AOSQ5T036 256 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 ZNF788Q6ZQV5 615 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 TPRX1Q8N7U7 411 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 C12orf43Q96C57 262 aaKnown RBP10.95□□□□□ -0.66
TUBD1-202ENST00000340993 CYYR1Q96J86 154 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 NUDT16L1Q9BRJ7 211 aaKnown RBP10.95□□□□□ -0.66
TUBD1-202ENST00000340993 SLITRK2Q9H156 845 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 RASL12Q9NYN1 266 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 ONECUT1Q9UBC0 465 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 A0A0G2JMP0 313 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 A0A0X1KG70 313 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 SHISA3A0PJX4 238 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 SIGLEC5O15389 551 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 NDUFA2O43678 99 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 NOS1APO75052 506 aaPredicted RBP10.95□□□□□ -0.66
TUBD1-202ENST00000340993 GPX5O75715 221 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 KDM4BO94953 1096 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 ACAA1P09110 424 aaPredicted RBP10.95□□□□□ -0.66
TUBD1-202ENST00000340993 SMIM18P0DKX4 95 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 CD36P16671 472 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 HES5Q5TA89 166 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 OR10K2Q6IF99 312 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 BRICD5Q6PL45 260 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 FAM185AQ8N0U4 392 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 OR4M2Q8NGB6 313 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 CPNE2Q96FN4 548 aaPredicted RBP10.95□□□□□ -0.66
TUBD1-202ENST00000340993 GFI1Q99684 422 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 METTL9Q9H1A3 318 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 C7orf69Q9H7B7 122 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 PLGRKTQ9HBL7 147 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 VCX3AQ9NNX9 186 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 HMG20AQ9NP66 347 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 DSCAML1Q8TD84 2053 aa10.95□□□□□ -0.66
TUBD1-202ENST00000340993 TRAV20A0A0B4J274 112 aa10.94□□□□□ -0.66
TUBD1-202ENST00000340993 A0A1W2PQ09 198 aa10.94□□□□□ -0.66
TUBD1-202ENST00000340993 CRTAPO75718 401 aaPredicted RBP10.94□□□□□ -0.66
TUBD1-202ENST00000340993 ALX3O95076 343 aa10.94□□□□□ -0.66
TUBD1-202ENST00000340993 KNG1P01042 644 aa10.94□□□□□ -0.66
TUBD1-202ENST00000340993 CSTBP04080 98 aaKnown RBP10.94□□□□□ -0.66
TUBD1-202ENST00000340993 PSMA1P25786 263 aaKnown RBP10.94□□□□□ -0.66
TUBD1-202ENST00000340993 DVL1P1P54792 670 aaPredicted RBP10.94□□□□□ -0.66
TUBD1-202ENST00000340993 CAV3P56539 151 aa10.94□□□□□ -0.66
TUBD1-202ENST00000340993 EDDM3BP56851 147 aa10.94□□□□□ -0.66
TUBD1-202ENST00000340993 TRAM1Q15629 374 aa10.94□□□□□ -0.66
TUBD1-202ENST00000340993 FIP1L1Q6UN15 594 aaKnown RBP10.94□□□□□ -0.66
TUBD1-202ENST00000340993 C22orf15Q8WYQ4 148 aa10.94□□□□□ -0.66
TUBD1-202ENST00000340993 C1orf159Q96HA4 380 aa10.94□□□□□ -0.66
TUBD1-202ENST00000340993 PCGF1Q9BSM1 259 aa10.94□□□□□ -0.66
TUBD1-202ENST00000340993 SHARPINQ9H0F6 387 aa10.94□□□□□ -0.66
TUBD1-202ENST00000340993 PPA2Q9H2U2 334 aa10.94□□□□□ -0.66
TUBD1-202ENST00000340993 C2CD3Q4AC94 2353 aa10.94□□□□□ -0.66
TUBD1-202ENST00000340993 A0A0B4J203 849 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 IGHV2-70DA0A0C4DH43 119 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 TMEM82A0PJX8 343 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 ARL6IP5O75915 188 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 OR2H2O95918 312 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 ALDOBP05062 364 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 MYL9P24844 172 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 SRP14P37108 136 aaKnown RBP10.93□□□□□ -0.66
TUBD1-202ENST00000340993 ARF6P62330 175 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 MXD1Q05195 221 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 ATXN7L3Q14CW9 347 aaPredicted RBP10.93□□□□□ -0.66
TUBD1-202ENST00000340993 SYT6Q5T7P8 510 aaPredicted RBP10.93□□□□□ -0.66
TUBD1-202ENST00000340993 GLT8D1Q68CQ7 371 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 BTNL3Q6UXE8 466 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 C1orf229Q6ZS94 237 aaPredicted RBP10.93□□□□□ -0.66
TUBD1-202ENST00000340993 Q8IYB0 196 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 BPIFB2Q8N4F0 458 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 THRSPQ92748 146 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 BEX2Q9BXY8 128 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 TMPRSS13Q9BYE2 586 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 C19orf12Q9NSK7 152 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 TXNL4BQ9NX01 149 aaKnown RBP10.93□□□□□ -0.66
TUBD1-202ENST00000340993 KAAG1Q9UBP8 84 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 STUB1Q9UNE7 303 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 GEMIN2O14893 280 aaKnown RBP10.93□□□□□ -0.66
TUBD1-202ENST00000340993 PSPNO60542 156 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms