RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 KLF17Q5JT82 389 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-201ENST00000340074 FIP1L1Q6UN15 594 aaKnown RBP12.59□□□□□ -0.39
UBE3B-201ENST00000340074 LY6G5BQ8NDX9 201 aa12.59□□□□□ -0.39
UBE3B-201ENST00000340074 TNFAIP8L1Q8WVP5 186 aa12.59□□□□□ -0.39
UBE3B-201ENST00000340074 UPRTQ96BW1 309 aa12.59□□□□□ -0.39
UBE3B-201ENST00000340074 MGLLQ99685 303 aa12.59□□□□□ -0.39
UBE3B-201ENST00000340074 FAM192AQ9GZU8 254 aa12.59□□□□□ -0.39
UBE3B-201ENST00000340074 CNTD2Q9H8S5 307 aa12.59□□□□□ -0.39
UBE3B-201ENST00000340074 ISYNA1Q9NPH2 558 aa12.59□□□□□ -0.39
UBE3B-201ENST00000340074 ACOT13Q9NPJ3 140 aa12.59□□□□□ -0.39
UBE3B-201ENST00000340074 FOXJ3Q9UPW0 622 aa12.59□□□□□ -0.39
UBE3B-201ENST00000340074 TOX4O94842 621 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 HAND1O96004 215 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 TK1P04183 234 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 CHRM2P08172 466 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 CPEP16870 476 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 EPHA1P21709 976 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 MAPK3P27361 379 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-201ENST00000340074 OR3A4PP47883 348 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 EMX1Q04741 257 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-201ENST00000340074 TPBGQ13641 420 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 ZNF146Q15072 292 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 METTL11BQ5VVY1 283 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 UNQ9370/PRO34162Q6UXP9 181 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 ASCC1Q8N9N2 400 aaKnown RBP12.58□□□□□ -0.4
UBE3B-201ENST00000340074 PXT1Q8NFP0 134 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 C8orf46Q8TAG6 207 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 THRSPQ92748 146 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 TMEM203Q969S6 136 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 WDFY2Q96P53 400 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 PCGF1Q9BSM1 259 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 YTHDF1Q9BYJ9 559 aaKnown RBP12.58□□□□□ -0.4
UBE3B-201ENST00000340074 SIRPDQ9H106 197 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 RHOFQ9HBH0 211 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 ONECUT1Q9UBC0 465 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 GSTK1Q9Y2Q3 226 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 KIAA2026Q5HYC2 2103 aa12.58□□□□□ -0.4
UBE3B-201ENST00000340074 IGHV3OR16-10A0A075B7F0 116 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 TRAV40A0A0B4J280 105 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 K7N7A8 449 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 MRPS14O60783 128 aaKnown RBP12.57□□□□□ -0.4
UBE3B-201ENST00000340074 ZNF737O75373 536 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 MAS1P04201 325 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 IGHV4-38-2P0DP08 117 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 MMP9P14780 707 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 PTGFRP43088 359 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 SCGB2A2Q13296 93 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 SPIN3Q5JUX0 258 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 FAM27D1Q5T7N8 215 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 ZNF367Q7RTV3 350 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 FAM234AQ9H0X4 552 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 SEBOXQ9HB31 216 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-201ENST00000340074 GLS2Q9UI32 602 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 NUP50Q9UKX7 468 aa12.57□□□□□ -0.4
UBE3B-201ENST00000340074 FBN1P35555 2871 aaKnown RBP12.56□□□□□ -0.4
UBE3B-201ENST00000340074 A0A1W2PQ09 198 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 SC5DO75845 299 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 CDRT1O95170 752 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 MTNR1BP49286 362 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 GP2P55259 537 aaKnown RBP12.56□□□□□ -0.4
UBE3B-201ENST00000340074 RPS25P62851 125 aaKnown RBP12.56□□□□□ -0.4
UBE3B-201ENST00000340074 ASCL4Q6XD76 172 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 CEACAM19Q7Z692 300 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 PHC2Q8IXK0 858 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 FAM185AQ8N0U4 392 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 SPARTQ8N0X7 666 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 OR4M1Q8NGD0 313 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 OR10K1Q8NGX5 313 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 C22orf15Q8WYQ4 148 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 DMRTB1Q96MA1 342 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 TBX15Q96SF7 602 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 PPIL3Q9H2H8 161 aaKnown RBP12.56□□□□□ -0.4
UBE3B-201ENST00000340074 OCEL1Q9H607 264 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 C19orf12Q9NSK7 152 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 ING4Q9UNL4 249 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 LRRC42Q9Y546 428 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 KPTNQ9Y664 436 aa12.56□□□□□ -0.4
UBE3B-201ENST00000340074 TRBV23-1A0A0A0MS06 115 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 TMEM82A0PJX8 343 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 SH2D1BO14796 132 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 OR2H2O95918 312 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 RPL31P62899 125 aaKnown RBP12.55□□□□□ -0.4
UBE3B-201ENST00000340074 RSU1Q15404 277 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 KRTAP21-3Q3LHN1 58 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 ELP2Q6IA86 826 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 TMEM91Q6ZNR0 172 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 C17orf107Q6ZR85 190 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 CMTM4Q8IZR5 234 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 SVOPQ8N4V2 548 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 JAGN1Q8N5M9 183 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 SNX22Q96L94 193 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 CHST6Q9GZX3 395 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 EXOSC4Q9NPD3 245 aaKnown RBP12.55□□□□□ -0.4
UBE3B-201ENST00000340074 ZNF69Q9UC07 566 aa12.55□□□□□ -0.4
UBE3B-201ENST00000340074 SF3B6Q9Y3B4 125 aaKnown RBP12.55□□□□□ -0.4
UBE3B-201ENST00000340074 SIRPB1O00241 398 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 PSPNO60542 156 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 RGS9O75916 674 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-201ENST00000340074 HTR3BO95264 441 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 GABRR1P24046 479 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms