RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 SNIP1Q8TAD8 396 aaKnown RBP17.57■□□□□ 0.4
UBC-201ENST00000339647 SLC7A11Q9UPY5 501 aa17.57■□□□□ 0.4
UBC-201ENST00000339647 DOCK8Q8NF50 2099 aa17.57■□□□□ 0.4
UBC-201ENST00000339647 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.57■□□□□ 0.4
UBC-201ENST00000339647 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.57■□□□□ 0.4
UBC-201ENST00000339647 PAX1P15863 534 aa17.57■□□□□ 0.4
UBC-201ENST00000339647 ALDH3B1P43353 468 aa17.57■□□□□ 0.4
UBC-201ENST00000339647 CD81P60033 236 aa17.57■□□□□ 0.4
UBC-201ENST00000339647 NSDHLQ15738 373 aa17.57■□□□□ 0.4
UBC-201ENST00000339647 C20orf196Q8IYI0 205 aa17.57■□□□□ 0.4
UBC-201ENST00000339647 FAM221AA4D161 298 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 NPIPB13A6NJU9 1138 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 LIPT2A6NK58 231 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 NPIPB4C9JG80 1138 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 PHF1O43189 567 aaPredicted RBP17.56■□□□□ 0.4
UBC-201ENST00000339647 FOXL2P58012 376 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 RUNX1Q01196 453 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 SLC35G3Q8N808 338 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 LRTM2Q8N967 370 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 OR4D5Q8NGN0 318 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 POM121Q96HA1 1249 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 PGAM5Q96HS1 289 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 MMACHCQ9Y4U1 282 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 MED12Q93074 2177 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 PCDH15Q96QU1 1955 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 HSPB1P04792 205 aaKnown RBP17.56■□□□□ 0.4
UBC-201ENST00000339647 FUT3P21217 361 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 FOXF1Q12946 379 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 TAF9Q16594 264 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 ZNF506Q5JVG8 444 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 SP5Q6BEB4 398 aaPredicted RBP17.56■□□□□ 0.4
UBC-201ENST00000339647 SLC16A14Q7RTX9 510 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 LGI3Q8N145 548 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 NECAP2Q9NVZ3 263 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 THADAQ6YHU6 1953 aa17.56■□□□□ 0.4
UBC-201ENST00000339647 A0A087WZY1 265 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 C9J4A7 227 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 GEMIN2O14893 280 aaKnown RBP17.55■□□□□ 0.4
UBC-201ENST00000339647 TCAPO15273 167 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 EFNA2O43921 213 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 JMJD7P0C870 316 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 EPHA1P21709 976 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 RPL23AP62750 156 aaKnown RBP17.55■□□□□ 0.4
UBC-201ENST00000339647 HLA-DRB3P79483 266 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 SMAD4Q13485 552 aaKnown RBP17.55■□□□□ 0.4
UBC-201ENST00000339647 ZNF266Q14584 549 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 C17orf78Q8N4C9 275 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 NEU1Q99519 415 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 IGFLR1Q9H665 355 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 NCOA6Q14686 2063 aaPredicted RBP17.55■□□□□ 0.4
UBC-201ENST00000339647 FAM230AA0A1W2PPH8 454 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 NKX2-6A6NCS4 301 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 CA11O75493 328 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 PGA3P0DJD8 388 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 CASP6P55212 293 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 SLC22A25Q6T423 547 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 SLC35E3Q7Z769 313 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 CLDND2Q8NHS1 167 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 MAGT1Q9H0U3 335 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 WASF3Q9UPY6 502 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 A8MWP6 167 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 SLC33A1O00400 549 aaPredicted RBP17.55■□□□□ 0.4
UBC-201ENST00000339647 ANGPTL7O43827 346 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 CHAF1BQ13112 559 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 PPA1Q15181 289 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 OR8G1Q15617 311 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 NOXO1Q8NFA2 376 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 OR5R1Q8NH85 324 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 Q96M66 194 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 TP53RKQ96S44 253 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 C11orf1Q9H5F2 150 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 COPS7AQ9UBW8 275 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 TCFL5Q9UL49 500 aa17.55■□□□□ 0.4
UBC-201ENST00000339647 SPAG17Q6Q759 2223 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 CCDC163A0A0D9SF12 145 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 MKRN2OSH3BPM6 223 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 CST7O76096 145 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 FBXW4P57775 412 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 ARL6IP1Q15041 203 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 C1orf87Q8N0U7 546 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 ZNF664Q8N3J9 261 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 D2HGDHQ8N465 521 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 OR5C1Q8NGR4 320 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 THAP3Q8WTV1 239 aaPredicted RBP17.54■□□□□ 0.4
UBC-201ENST00000339647 CA5BP1Q8WTZ4 195 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 DDIT4LQ96D03 193 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 CALHM2Q9HA72 323 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 GLRX2Q9NS18 164 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 F5H5K5 113 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 C5orf24Q7Z6I8 188 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 TMEM217Q8N7C4 229 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 OR8G5Q8NG78 346 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 OR1N1Q8NGS0 311 aa17.54■□□□□ 0.4
UBC-201ENST00000339647 PROB1E7EW31 1015 aa17.53■□□□□ 0.4
UBC-201ENST00000339647 PITX3O75364 302 aa17.53■□□□□ 0.4
UBC-201ENST00000339647 GZMBP10144 247 aa17.53■□□□□ 0.4
UBC-201ENST00000339647 FOLR1P15328 257 aa17.53■□□□□ 0.4
UBC-201ENST00000339647 RTL6Q6ICC9 239 aa17.53■□□□□ 0.4
UBC-201ENST00000339647 UEVLDQ8IX04 471 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms