RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 NECAP2Q9NVZ3 263 aa14.03□□□□□ -0.16
SCARB1-202ENST00000339570 ST8SIA3O43173 380 aa14.03□□□□□ -0.16
SCARB1-202ENST00000339570 YRDCQ86U90 279 aaKnown RBP14.03□□□□□ -0.16
SCARB1-202ENST00000339570 PRR18Q8N4B5 295 aa14.03□□□□□ -0.16
SCARB1-202ENST00000339570 OR6X1Q8NH79 312 aa14.03□□□□□ -0.16
SCARB1-202ENST00000339570 EDARADDQ8WWZ3 215 aa14.03□□□□□ -0.16
SCARB1-202ENST00000339570 ZFAND5O76080 213 aa14.02□□□□□ -0.16
SCARB1-202ENST00000339570 HLA-HP01893 362 aa14.02□□□□□ -0.16
SCARB1-202ENST00000339570 CTSDP07339 412 aaPredicted RBP14.02□□□□□ -0.16
SCARB1-202ENST00000339570 UBE2KP61086 200 aa14.02□□□□□ -0.16
SCARB1-202ENST00000339570 ENDOGQ14249 297 aaKnown RBP14.02□□□□□ -0.16
SCARB1-202ENST00000339570 IGFBP7Q16270 282 aa14.02□□□□□ -0.16
SCARB1-202ENST00000339570 DMBX1Q8NFW5 382 aa14.02□□□□□ -0.16
SCARB1-202ENST00000339570 OR2M3Q8NG83 312 aa14.02□□□□□ -0.16
SCARB1-202ENST00000339570 OR10AD1Q8NGE0 317 aa14.02□□□□□ -0.16
SCARB1-202ENST00000339570 MR1Q95460 341 aa14.02□□□□□ -0.16
SCARB1-202ENST00000339570 NTNG2Q96CW9 530 aa14.02□□□□□ -0.16
SCARB1-202ENST00000339570 SLC35B3Q9H1N7 401 aa14.02□□□□□ -0.16
SCARB1-202ENST00000339570 DANCRP0C864 163 aa14.02□□□□□ -0.17
SCARB1-202ENST00000339570 LYL1P12980 280 aa14.02□□□□□ -0.17
SCARB1-202ENST00000339570 HTR5AP47898 357 aa14.02□□□□□ -0.17
SCARB1-202ENST00000339570 RPS18P62269 152 aaKnown RBP14.02□□□□□ -0.17
SCARB1-202ENST00000339570 NFAM1Q8NET5 270 aaPredicted RBP14.02□□□□□ -0.17
SCARB1-202ENST00000339570 CHST5Q9GZS9 411 aa14.02□□□□□ -0.17
SCARB1-202ENST00000339570 CRLF2Q9HC73 371 aa14.02□□□□□ -0.17
SCARB1-202ENST00000339570 EIF1BO60739 113 aaKnown RBP14.02□□□□□ -0.17
SCARB1-202ENST00000339570 CHATP28329 748 aa14.02□□□□□ -0.17
SCARB1-202ENST00000339570 EIF1P41567 113 aaKnown RBP14.02□□□□□ -0.17
SCARB1-202ENST00000339570 RPS23P62266 143 aaKnown RBP14.02□□□□□ -0.17
SCARB1-202ENST00000339570 TMEM187Q14656 261 aa14.02□□□□□ -0.17
SCARB1-202ENST00000339570 PLCXD3Q63HM9 321 aa14.02□□□□□ -0.17
SCARB1-202ENST00000339570 GUSBP11Q6P575 273 aa14.02□□□□□ -0.17
SCARB1-202ENST00000339570 FAM89BQ8N5H3 189 aa14.02□□□□□ -0.17
SCARB1-202ENST00000339570 ZDBF2Q9HCK1 2354 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 SVILO95425 2214 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 TGIF2-C20orf24A0A0A6YYL0 155 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 SMIM6P0DI80 62 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 ATP6V0CP27449 155 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 PTGDSP41222 190 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 NPBWR2P48146 333 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 VAMP2P63027 116 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 FAM3AP98173 230 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 EWSR1Q01844 656 aaKnown RBP eCLIP14.01□□□□□ -0.178e-7■■■□□ 16.1
SCARB1-202ENST00000339570 ZNF574Q6ZN55 896 aaPredicted RBP14.01□□□□□ -0.17
SCARB1-202ENST00000339570 UBAC2Q8NBM4 344 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 OR5C1Q8NGR4 320 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 PRO1933Q9H354 126 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 NCOR1O75376 2440 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 TRAV39A0A0B4J263 110 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 IGKV1-12A0A0C4DH73 117 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 AP4M1O00189 453 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 UBE2CO00762 179 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 DHHO43323 396 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 IGKV1D-12P01611 117 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 S100A8P05109 93 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 CCL3P10147 92 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 RAB2AP61019 212 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 ZNF695Q8IW36 515 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 RNASE11Q8TAA1 199 aaKnown RBP14.01□□□□□ -0.17
SCARB1-202ENST00000339570 S100PBPQ96BU1 408 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 Q96M66 194 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 STARD10Q9Y365 291 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 DOCK11Q5JSL3 2073 aa14.01□□□□□ -0.17
SCARB1-202ENST00000339570 ZFP92A6NM28 416 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 ZNF724A8MTY0 619 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 CYB5BO43169 146 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 PRF1P14222 555 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 EIF2S3P41091 472 aaKnown RBP14□□□□□ -0.17
SCARB1-202ENST00000339570 CYB561D1Q8N8Q1 229 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 OR5L2Q8NGL0 311 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 OR10D4PQ8NGN7 298 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 OR1J1Q8NGS3 322 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 PBDC1Q9BVG4 233 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 GPR27Q9NS67 375 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 IL36RNQ9UBH0 155 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 DKKL1Q9UK85 242 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 WRBO00258 174 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 GPR137BO60478 399 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 TRAPPC6AO75865 159 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 AGAP20933 346 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 FGF8P55075 233 aaPredicted RBP14□□□□□ -0.17
SCARB1-202ENST00000339570 ZNF154Q13106 437 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 SLC25A26Q70HW3 274 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 PLPP5Q8NEB5 264 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 RAB39BQ96DA2 213 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 PLEKHA2Q9HB19 425 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 FBLN5Q9UBX5 448 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 H3BQ15 152 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 ADAM20O43506 726 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 P2RY1P47900 373 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 AFF3P51826 1226 aaKnown RBP14□□□□□ -0.17
SCARB1-202ENST00000339570 LINC00469Q8N7U9 141 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 SPTSSAQ969W0 71 aa14□□□□□ -0.17
SCARB1-202ENST00000339570 SPACA9Q96E40 222 aaPredicted RBP14□□□□□ -0.17
SCARB1-202ENST00000339570 DSPP15924 2871 aaKnown RBP13.99□□□□□ -0.17
SCARB1-202ENST00000339570 A0A1W2PNV4 684 aa13.99□□□□□ -0.17
SCARB1-202ENST00000339570 IGSF23A1L1A6 192 aa13.99□□□□□ -0.17
SCARB1-202ENST00000339570 HMGB3O15347 200 aaKnown RBP13.99□□□□□ -0.17
SCARB1-202ENST00000339570 CXCL1P09341 107 aa13.99□□□□□ -0.17
SCARB1-202ENST00000339570 ZNF84P51523 738 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms