RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 A0A0X1KG70 313 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 OVOL3O00110 214 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 SH2D1BO14796 132 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 GEMIN2O14893 280 aaKnown RBP12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 OR7C1O76099 320 aaPredicted RBP12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 HPXP02790 462 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 GSTP1P09211 210 aaKnown RBP12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 GABRR1P24046 479 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 BLVRBP30043 206 aaPredicted RBP12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 PPP5CP53041 499 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 TAS2R20P59543 309 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 ZNF79Q15937 498 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 GDPD1Q8N9F7 314 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 CHST4Q8NCG5 386 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 OR4M2Q8NGB6 313 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 IGFBPL1Q8WX77 278 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 NEDD4LQ96PU5 975 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 CCL19Q99731 98 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 SEBOXQ9HB31 216 aaPredicted RBP12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 DNAJB11Q9UBS4 358 aa12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 MRPS7Q9Y2R9 242 aaKnown RBP12.23□□□□□ -0.45
NIPAL3-202ENST00000339255 TRAV18A0A075B6X5 111 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 A0A0A6YYD4 124 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 FOXI3A8MTJ6 420 aaPredicted RBP12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 SERPINE3A8MV23 424 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 CTDSPLO15194 276 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 PDCD6O75340 191 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 MUC1P15941 1255 aaPredicted RBP12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 HIST1H1DP16402 221 aaKnown RBP12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 PTH2RP49190 550 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 IKZF1Q13422 519 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 MICBQ29980 383 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 MOGAT2Q3SYC2 334 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 RDH5Q92781 318 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 WDR13Q9H1Z4 485 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 TMEM106BQ9NUM4 274 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 TMEM178BH3BS89 294 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 WNT9BO14905 357 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 SOCS1O15524 211 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 FSTL3O95633 263 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 GLAP06280 429 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 FUT3P21217 361 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 CHATP28329 748 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 BATF2Q8N1L9 274 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 CCL17Q92583 94 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 CCDC32Q9BV29 185 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 SRRQ9GZT4 340 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 AUNIPQ9H7T9 357 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 PLEKHJ1Q9NW61 149 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 RCC2Q9P258 522 aaKnown RBP12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 NLKQ9UBE8 527 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 EDARQ9UNE0 448 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 ABCA12Q86UK0 2595 aa12.22□□□□□ -0.45
NIPAL3-202ENST00000339255 ANKRD17O75179 2603 aaKnown RBP12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 TRAV38-1A0A0B4J264 116 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 OR2AT4A6NND4 320 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 CA11O75493 328 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 CYB5R3P00387 301 aaPredicted RBP12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 HLA-DQB1P01920 261 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 EGR1P18146 543 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 EFNA4P52798 201 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 GMFBP60983 142 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 PNLIPRP3Q17RR3 467 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 PYDC2Q56P42 97 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 SIGIRRQ6IA17 410 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 Q6ZTK2 550 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 PEG10Q86TG7 708 aaKnown RBP12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 IZUMO1Q8IYV9 350 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 BORCS5Q969J3 196 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 MARVELD3Q96A59 401 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 ABHD1Q96SE0 405 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 SCPEP1Q9HB40 452 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 MYOZ1Q9NP98 299 aaPredicted RBP12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 IL36RNQ9UBH0 155 aa12.21□□□□□ -0.45
NIPAL3-202ENST00000339255 OOEPA6NGQ2 149 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 LGALS8O00214 317 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 MFNGO00587 321 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 HAND1O96004 215 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 F12P00748 615 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 MELTFP08582 738 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 COL8A1P27658 744 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 SNU13P55769 128 aaKnown RBP12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 TMEM50BP56557 158 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 RBM39Q14498 530 aaKnown RBP12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 KCNJ8Q15842 424 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 ZNF260Q3ZCT1 412 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 CDNFQ49AH0 187 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 PLAC9Q5JTB6 97 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 TEX36Q5VZQ5 186 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 SNX29P2Q8IUI4 249 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 Q8N402 240 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 BOLLQ8N9W6 283 aaKnown RBP12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 SMIM4Q8WVI0 70 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 ARHGAP5-AS1Q96IT6 56 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 WIPI2Q9Y4P8 454 aa12.2□□□□□ -0.46
NIPAL3-202ENST00000339255 TMEM235A6NFC5 223 aa12.19□□□□□ -0.46
NIPAL3-202ENST00000339255 GABARAPH6UMI1 98 aa12.19□□□□□ -0.46
NIPAL3-202ENST00000339255 SULT1C2O00338 296 aa12.19□□□□□ -0.46
NIPAL3-202ENST00000339255 DEGS1O15121 323 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms