RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 OR5D13Q8NGL4 314 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 OR6M1Q8NGM8 313 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 OR10K1Q8NGX5 313 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 PPP1R35Q8TAP8 253 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 TBC1D15Q8TC07 691 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 MRPS24Q96EL2 167 aaKnown RBP9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 NKX3-1Q99801 234 aaPredicted RBP9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 LPAR2Q9HBW0 351 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 OR5V1Q9UGF6 321 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 LOC105371242A0A075B767 164 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 H3BUI4 141 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 SLC17A2O00624 439 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 PHF1O43189 567 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 HAND1O96004 215 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 NDUFB7P17568 137 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 DUSP1P28562 367 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 ALDH3B2P48448 385 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 DVL1P1P54792 670 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 SNU13P55769 128 aaKnown RBP9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 LCN2P80188 198 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 RAB11BQ15907 218 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 DGUOKQ16854 277 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 FAM166AQ6J272 317 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 FAM216BQ8N7L0 139 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 OR51T1Q8NGJ9 327 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 ST8SIA4Q92187 359 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 SNX22Q96L94 193 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 GAFA1Q96PS6 74 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 FUNDC2Q9BWH2 189 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 FAM234AQ9H0X4 552 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 CST11Q9H112 138 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 YAE1D1Q9NRH1 226 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 CTSZQ9UBR2 303 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 SLC25A10Q9UBX3 287 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 ZNF222Q9UK12 451 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 POLR3KQ9Y2Y1 108 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 MAB21L2Q9Y586 359 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 ITPR3Q14573 2671 aa9.91□□□□□ -0.82
SPTLC1-202ENST00000337841 PPIAL4CA0A0B4J2A2 164 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 A8MXK9 166 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 SLC22A1O15245 554 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 CRTAPO75718 401 aaPredicted RBP9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 BPNT1O95861 308 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 LIPFP07098 398 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 ZNF44P15621 663 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 SERPINA2P20848 420 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 GATA3P23771 443 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 ZFP36P26651 326 aaKnown RBP9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 SDC2P34741 201 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 SEC61A1P61619 476 aaKnown RBP9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 COL10A1Q03692 680 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 IL13RA2Q14627 380 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 ASCC1Q8N9N2 400 aaKnown RBP9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 CHST4Q8NCG5 386 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 ZNRF1Q8ND25 227 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 TMEM185AQ8NFB2 350 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 KCNG3Q8TAE7 436 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 RAB40AQ8WXH6 277 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 TMEM186Q96B77 213 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 POM121Q96HA1 1249 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 SMR3AQ99954 134 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 CENPOQ9BU64 300 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 HIF1ANQ9NWT6 349 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 KCNS2Q9ULS6 477 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 ST3GAL6Q9Y274 331 aa9.9□□□□□ -0.82
SPTLC1-202ENST00000337841 CSMD2Q7Z408 3487 aa9.9□□□□□ -0.83
SPTLC1-202ENST00000337841 CHD3Q12873 2000 aaKnown RBP9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 IFITM5A6NNB3 132 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 NOTOA8MTQ0 251 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 A8MV72 311 aaPredicted RBP9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 K7N7A8 449 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 TFF1P04155 84 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 TK1P04183 234 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 ARSBP15848 533 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 GABRR1P24046 479 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 LMO1P25800 156 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 CEBPDP49716 269 aaPredicted RBP9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 CAV3P56539 151 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 LSM3P62310 102 aaKnown RBP9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 P2RY14Q15391 338 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 C2orf76Q3KRA6 126 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 NHLRC3Q5JS37 347 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 HES5Q5TA89 166 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 DCAF12L2Q5VW00 463 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 GPR107Q5VW38 600 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 FAHD2BQ6P2I3 314 aaPredicted RBP9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 BTNL3Q6UXE8 466 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 BTN2A1Q7KYR7 527 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 LINC00596Q86U02 117 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 ANKRD13BQ86YJ7 626 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 H1FXQ92522 213 aaKnown RBP9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 SLC25A28Q96A46 364 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM3DQ96BQ1 224 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 FAHD2AQ96GK7 314 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 GFI1Q99684 422 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 SELENOIQ9C0D9 397 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 IL36RNQ9UBH0 155 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 STEAP1Q9UHE8 339 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 OTOGQ6ZRI0 2925 aa9.89□□□□□ -0.83
SPTLC1-202ENST00000337841 A0A0G2JK05 382 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms