RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 RFNGQ9Y644 331 aa12.84□□□□□ -0.35
UBA1-201ENST00000335972 DIDO1Q9BTC0 2240 aaKnown RBP12.83□□□□□ -0.35
UBA1-201ENST00000335972 hCG_38984A0A1B0GV85 526 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 NGFP01138 241 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 GPM6AP51674 278 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 MST1LQ2TV78 715 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 ATP1A1-AS1Q5TC04 95 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 SLC30A7Q8NEW0 376 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 RNF141Q8WVD5 230 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 SPSB1Q96BD6 273 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 INTS12Q96CB8 462 aaKnown RBP12.83□□□□□ -0.36
UBA1-201ENST00000335972 TAF9BQ9HBM6 251 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 TNRC6BQ9UPQ9 1833 aaKnown RBP12.83□□□□□ -0.36
UBA1-201ENST00000335972 K7EPK0 472 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 BET1O15155 118 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 FOXO1Q12778 655 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 NSUN5P2Q63ZY6 315 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 FAM71E2Q8N5Q1 922 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 SLC7A11Q9UPY5 501 aa12.83□□□□□ -0.36
UBA1-201ENST00000335972 TMEM265A0A087WTH1 108 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 C9orf172C9J069 976 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 OR52M1Q8NGK5 317 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 CNTNAP3BQ96NU0 1288 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 CNTNAP3Q9BZ76 1288 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 C12orf49Q9H741 205 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 ATG12O94817 140 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 NFYBP25208 207 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 AKR1C3P42330 323 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 FHITP49789 147 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 KCNE4Q8WWG9 221 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 NECAP2Q9NVZ3 263 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 PARPBPQ9NWS1 579 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 CRYM-AS1A6NIL9 109 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 YKT6O15498 198 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 PHF1O43189 567 aaPredicted RBP12.82□□□□□ -0.36
UBA1-201ENST00000335972 C1QL1O75973 258 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 BCL3P20749 454 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 AADACP22760 399 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 TMEM33P57088 247 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 LDLRAD3Q86YD5 345 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 STOML3Q8TAV4 291 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 NEK7Q8TDX7 302 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 ARL11Q969Q4 196 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 FGF23Q9GZV9 251 aaPredicted RBP12.82□□□□□ -0.36
UBA1-201ENST00000335972 KIAA2026Q5HYC2 2103 aa12.82□□□□□ -0.36
UBA1-201ENST00000335972 FGF16O43320 207 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 HAAOP46952 286 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 NPBWR1P48145 328 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 IL15RAQ13261 267 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 TSC22D1Q15714 1073 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 ABLIM2Q6H8Q1 611 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 DNTTIP1Q9H147 329 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 IL17BQ9UHF5 180 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 CACNA1HO95180 2353 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 IFNA21P01568 189 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 MBPP02686 304 aaPredicted RBP12.81□□□□□ -0.36
UBA1-201ENST00000335972 SERPINA7P05543 415 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 CTSDP07339 412 aaPredicted RBP12.81□□□□□ -0.36
UBA1-201ENST00000335972 ICAM2P13598 275 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 MUC1P15941 1255 aaPredicted RBP12.81□□□□□ -0.36
UBA1-201ENST00000335972 SPIN3Q5JUX0 258 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 SPATA46Q5T0L3 261 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 H3F3CQ6NXT2 135 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 ETV3LQ6ZN32 361 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 UBALD1Q8TB05 177 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 AQP10Q96PS8 301 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 SLC2A9Q9NRM0 540 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 RP1L1Q8IWN7 2480 aaPredicted RBP12.81□□□□□ -0.36
UBA1-201ENST00000335972 TRAV39A0A0B4J263 110 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 A0A1W2PR80 420 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 LILRA1O75019 489 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 NEURL1O76050 574 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 GFRA1P56159 465 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 LHFPL2Q6ZUX7 228 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 CCDC36Q8IYA8 594 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 BCO1Q9HAY6 547 aa12.81□□□□□ -0.36
UBA1-201ENST00000335972 C9JQL5 133 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 TSPAN9O75954 239 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 MMP7P09237 267 aaPredicted RBP12.8□□□□□ -0.36
UBA1-201ENST00000335972 HOXA6P31267 233 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 MALLQ13021 153 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 SSPNQ14714 243 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 NTNG2Q96CW9 530 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 PRRX2Q99811 253 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 MEMO1Q9Y316 297 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 TNFSF12O43508 249 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 DAZAP2Q15038 168 aaPredicted RBP12.8□□□□□ -0.36
UBA1-201ENST00000335972 OR2M7Q8NG81 312 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 SECTM1Q8WVN6 248 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 LPAR3Q9UBY5 353 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 CYC1P08574 325 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 CD80P33681 288 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 MPLP40238 635 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 PLGLB1Q02325 96 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 SMCO1Q147U7 214 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 ABHD17BQ5VST6 288 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 MAGT1Q9H0U3 335 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 NAA60Q9H7X0 242 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 RHOFQ9HBH0 211 aa12.8□□□□□ -0.36
UBA1-201ENST00000335972 ZNF816-ZNF321PA0A0X1KG74 233 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms