RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 RNF150Q9ULK6 438 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 TMED3Q9Y3Q3 217 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 MED13Q9UHV7 2174 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 SORL1Q92673 2214 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 TRAV8-7A0A075B6U6 113 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 FAM90A27PA6NNH2 459 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 CEBPZOSA8MTT3 80 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 H7C2Y5 167 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 MST1P26927 711 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 UCP2P55851 309 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 TAS2R30P59541 319 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 SLC9A3R2Q15599 337 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 HYAL4Q2M3T9 481 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 C11orf91Q3C1V1 193 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 AKR1C8PQ5T2L2 129 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 PXDC1Q5TGL8 231 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 SAXO1Q8IYX7 474 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 MUC20Q8N307 709 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-201ENST00000335508 OR4C16Q8NGL9 310 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 OR13C8Q8NGS7 320 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 SEC22CQ9BRL7 303 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 ZNF2Q9BSG1 426 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-201ENST00000335508 COMMD5Q9GZQ3 224 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 HEXA-AS1Q9H8Q6 139 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 PLSCR2Q9NRY7 297 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 LGALS8O00214 317 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 HRASP01112 189 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 IGHG3P01860 377 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 SLC6A1P30531 599 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 H3F3AP84243 136 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 PMP22Q01453 160 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 TLE1Q04724 770 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 DBPQ10586 325 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-201ENST00000335508 SPATA46Q5T0L3 261 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 FOXB2Q5VYV0 432 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 IGFL3Q6UXB1 125 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 H1FXQ92522 213 aaKnown RBP5.99□□□□□ -1.45
SF3B1-201ENST00000335508 ARL11Q969Q4 196 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 ORAI1Q96D31 301 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 MSI2Q96DH6 328 aaKnown RBP5.99□□□□□ -1.45
SF3B1-201ENST00000335508 HSF4Q9ULV5 492 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 MRPS18BQ9Y676 258 aaKnown RBP5.99□□□□□ -1.45
SF3B1-201ENST00000335508 TRBV5-7A0A0A0MS05 114 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 PROB1E7EW31 1015 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 SYNGR3O43761 229 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 ADH4P08319 380 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 TIMP3P35625 211 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 CFAP77Q6ZQR2 320 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 FJX1Q86VR8 437 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 LRRC75AQ8NAA5 344 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 OR8U1Q8NH10 309 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 SLC25A40Q8TBP6 338 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 AKR1E2Q96JD6 320 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 GPR137Q96N19 417 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 SSX3Q99909 188 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 PIMREGQ9BSJ6 248 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 ZDHHC11Q9H8X9 412 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 KLK11Q9UBX7 282 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 A0A0B4J2A0 478 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 CDIPTO14735 213 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 PHF1O43189 567 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-201ENST00000335508 GSTZ1O43708 216 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-201ENST00000335508 IFNA17P01571 189 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 GPR12P47775 334 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 SUB1P53999 127 aaKnown RBP eCLIP5.98□□□□□ -1.451e-8■■■■■ 27.2
SF3B1-201ENST00000335508 PLGLAQ15195 96 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 CEACAM21Q3KPI0 293 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 OTPQ5XKR4 325 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 COMTD1Q86VU5 262 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 TEX29Q8N6K0 151 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 OR51A4Q8NGJ6 313 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 GIMAP1Q8WWP7 306 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 ASCL3Q9NQ33 180 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 UBQLN2Q9UHD9 624 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 SHPKQ9UHJ6 478 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 SF3B6Q9Y3B4 125 aaKnown RBP5.98□□□□□ -1.45
SF3B1-201ENST00000335508 PTPRDP23468 1912 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 PRR14LQ5THK1 2151 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 ZNF716A6NP11 495 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 RAB27BO00194 218 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 OR2F2O95006 317 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 IFNA4P05014 189 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 IL11P20809 199 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 PSMB6P28072 239 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 ASCL1P50553 236 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 CLDN18P56856 261 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 OR2F1Q13607 317 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 PGLYRP3Q96LB9 341 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 TRAF4Q9BUZ4 470 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-201ENST00000335508 OR2J1Q9GZK6 312 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 PARD6AQ9NPB6 346 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 GFOD1Q9NXC2 390 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 PURGQ9UJV8 347 aaKnown RBP5.98□□□□□ -1.45
SF3B1-201ENST00000335508 RNF115Q9Y4L5 304 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 LY6G6EA0A0G2JKS1 128 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 SIRPB1O00241 398 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 ADAM20O43506 726 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 PLXNA3P51805 1871 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 OR51H1Q8NH63 302 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 CORO2AQ92828 525 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms