RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 C3orf80F5H4A9 247 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 KNG1P01042 644 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 HPXP02790 462 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 BLVRBP30043 206 aaPredicted RBP8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 SNU13P55769 128 aaKnown RBP8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 MRPS10P82664 201 aaKnown RBP8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 ZNF146Q15072 292 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 PLAC9Q5JTB6 97 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 SIGIRRQ6IA17 410 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 SNX29P2Q8IUI4 249 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 CHST4Q8NCG5 386 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 C14orf79Q96F83 325 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 SDHCQ99643 169 aaPredicted RBP8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 WDR13Q9H1Z4 485 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 IFT22Q9H7X7 185 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 RCC2Q9P258 522 aaKnown RBP8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 PLEKHA6Q9Y2H5 1048 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 GCN1Q92616 2671 aaKnown RBP8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 H3BUI4 141 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 MFNGO00587 321 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 PDCD6O75340 191 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 OR7C1O76099 320 aaPredicted RBP8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 GSTP1P09211 210 aaKnown RBP8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 CHATP28329 748 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 TMEM50BP56557 158 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 GMFBP60983 142 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 IKZF1Q13422 519 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 ARL6IP1Q15041 203 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 ZNF260Q3ZCT1 412 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 ZNF295-AS1Q8N0V1 137 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 NEU4Q8WWR8 484 aaPredicted RBP8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 IGFBPL1Q8WX77 278 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 ARHGAP5-AS1Q96IT6 56 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 PSMG3-AS1Q96PY0 264 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 ZNF581Q9P0T4 197 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 HSF4Q9ULV5 492 aa8.62□□□□□ -1.03
VIPAS39-201ENST00000327028 DSCAMO60469 2012 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 IGHV1-69-2A0A0G2JMI3 117 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 GSTZ1O43708 216 aaPredicted RBP8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 CYB5R3P00387 301 aaPredicted RBP8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 CD80P33681 288 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 HOXA4Q00056 320 aaPredicted RBP8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 CDNFQ49AH0 187 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 NKAPLQ5M9Q1 402 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 RTN4RL2Q86UN3 420 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 TGIF2LYQ8IUE0 185 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 C1orf87Q8N0U7 546 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 SMIM4Q8WVI0 70 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 NEDD4LQ96PU5 975 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 PECRQ9BY49 303 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 MELTFP08582 738 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 GNB3P16520 340 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 FUT3P21217 361 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 MRPS11P82912 194 aaKnown RBP8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 PNLIPRP3Q17RR3 467 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 Q6P435 159 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 Q6ZTK2 550 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 Q8N402 240 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 BOLLQ8N9W6 283 aaKnown RBP8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 ST8SIA4Q92187 359 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 SEBOXQ9HB31 216 aaPredicted RBP8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 SCPEP1Q9HB40 452 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 SPACA1Q9HBV2 294 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 TMEM106BQ9NUM4 274 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 TREM2Q9NZC2 230 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 NLKQ9UBE8 527 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 GLS2Q9UI32 602 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 WIPI2Q9Y4P8 454 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 CACNG2Q9Y698 323 aa8.61□□□□□ -1.03
VIPAS39-201ENST00000327028 DOPEY2Q9Y3R5 2298 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 TMEM235A6NFC5 223 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 SERPINE3A8MV23 424 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 TMEM178BH3BS89 294 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 GABARAPH6UMI1 98 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 OVOL3O00110 214 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 SH2D1BO14796 132 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 CA11O75493 328 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 HAND1O96004 215 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 COL8A1P27658 744 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 DUSP1P28562 367 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 PRSS3P35030 304 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 RBMXP38159 391 aaKnown RBP8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 DGCR2P98153 550 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 DNM1P46Q6ZS02 220 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 C6orf201Q7Z4U5 140 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 GCDHQ92947 438 aaPredicted RBP8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 SEH1LQ96EE3 360 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 ZMAT3Q9HA38 289 aaKnown RBP8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 PALMDQ9NP74 551 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 DCAF16Q9NXF7 216 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 ETAA1Q9NY74 926 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 DNAJB11Q9UBS4 358 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 KCNK7Q9Y2U2 307 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 LRBAP50851 2863 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 DCHS2Q6V1P9 2916 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 SULT1C2O00338 296 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 UPK1BO75841 260 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 GLAP06280 429 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms