RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 GPHA2Q96T91 129 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 ARRDC1-AS1Q9H2J1 176 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 CDH20Q9HBT6 801 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 ZNF286AQ9HBT8 521 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 RCC2Q9P258 522 aaKnown RBP13.45□□□□□ -0.26
VARS2-201ENST00000321897 DUSP13Q9UII6 198 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 TRAV39A0A0B4J263 110 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 RBP2P50120 134 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 ARL6IP1Q15041 203 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 GCNT2Q8N0V5 402 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 DEFB123Q8N688 67 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 FAM210BQ96KR6 192 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 EIF1BO60739 113 aaKnown RBP13.44□□□□□ -0.26
VARS2-201ENST00000321897 DFFBO76075 338 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 SURF2Q15527 256 aaPredicted RBP13.44□□□□□ -0.26
VARS2-201ENST00000321897 RHBDD2Q6NTF9 364 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 LFNGQ8NES3 379 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 OPA3Q9H6K4 179 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 A0A1W2PPC1 479 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 RNF222A6NCQ9 220 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 TGOLN2O43493 480 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 VSIG8P0DPA2 414 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 CCL11P51671 97 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 SHBQ15464 509 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 ASB13Q8WXK3 278 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 MRPL24Q96A35 216 aaKnown RBP13.44□□□□□ -0.26
VARS2-201ENST00000321897 SAT2Q96F10 170 aaPredicted RBP13.44□□□□□ -0.26
VARS2-201ENST00000321897 UTP23Q9BRU9 249 aaKnown RBP13.44□□□□□ -0.26
VARS2-201ENST00000321897 ZNF426Q9BUY5 554 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 CREBBPQ92793 2442 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 WDR1O75083 606 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 NRASP01111 189 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 HEXAP06865 529 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 ZNF32P17041 273 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 RPS4Y1P22090 263 aaKnown RBP13.44□□□□□ -0.26
VARS2-201ENST00000321897 CASP6P55212 293 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 H3F3AP84243 136 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 ECH1Q13011 328 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 ZNF345Q14585 488 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 NSUN5P2Q63ZY6 315 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 DRAM2Q6UX65 266 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 CXorf67Q86X51 503 aaPredicted RBP13.44□□□□□ -0.26
VARS2-201ENST00000321897 ZNF485Q8NCK3 441 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 FLVCR1-AS1Q8TAF5 88 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 PACRGQ96M98 296 aaPredicted RBP13.44□□□□□ -0.26
VARS2-201ENST00000321897 GGACTQ9BVM4 153 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 OR6C6A6NF89 314 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 ANKRD30BLA7E2S9 258 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 ZNF25P17030 456 aaPredicted RBP13.44□□□□□ -0.26
VARS2-201ENST00000321897 RPS11P62280 158 aaKnown RBP eCLIP13.44□□□□□ -0.26
VARS2-201ENST00000321897 SSBP1Q04837 148 aaKnown RBP13.44□□□□□ -0.26
VARS2-201ENST00000321897 ZNF343Q6P1L6 599 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 DHRS13Q6UX07 377 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 MRGPREQ86SM8 312 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 IER2Q9BTL4 223 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 KCNK7Q9Y2U2 307 aa13.44□□□□□ -0.26
VARS2-201ENST00000321897 CUL9Q8IWT3 2517 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 MFNGO00587 321 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 TRGC2P03986 189 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 FGF8P55075 233 aaPredicted RBP13.43□□□□□ -0.26
VARS2-201ENST00000321897 SSTP61278 116 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 GRB2P62993 217 aaKnown RBP13.43□□□□□ -0.26
VARS2-201ENST00000321897 CEBPEQ15744 281 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 TVP23CQ96ET8 276 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 DMRTA2Q96SC8 542 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 SMIM7Q9BQ49 75 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 RAB18Q9NP72 206 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 DOK5Q9P104 306 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 TRAPPC2LQ9UL33 140 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 GATCO43716 136 aaKnown RBP13.43□□□□□ -0.26
VARS2-201ENST00000321897 CER1O95813 267 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 HBE1P02100 147 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 MMP9P14780 707 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 DHRS7BQ6IAN0 325 aaPredicted RBP13.43□□□□□ -0.26
VARS2-201ENST00000321897 ARRDC1Q8N5I2 433 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 SLC25A43Q8WUT9 341 aaPredicted RBP13.43□□□□□ -0.26
VARS2-201ENST00000321897 ZNF501Q96CX3 271 aaPredicted RBP13.43□□□□□ -0.26
VARS2-201ENST00000321897 PLEKHA2Q9HB19 425 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 IL17BQ9UHF5 180 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 BOKQ9UMX3 212 aaPredicted RBP13.43□□□□□ -0.26
VARS2-201ENST00000321897 CCDC187A0A096LP49 1063 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 LOC102725191A0A1B0GVB3 256 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 LIPT2A6NK58 231 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 IAPPP10997 89 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 ASB10Q8WXI3 467 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 MSL2Q9HCI7 577 aa13.43□□□□□ -0.26
VARS2-201ENST00000321897 ARGFXA6NJG6 315 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 HIST1H1DP16402 221 aaKnown RBP13.42□□□□□ -0.26
VARS2-201ENST00000321897 FGF7P21781 194 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 ZXDAP98168 799 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 GAMTQ14353 236 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 EDDM3AQ14507 147 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 AADACL3Q5VUY0 350 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 D2HGDHQ8N465 521 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 OR10C1Q96KK4 312 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 PQLC2LA1A4F0 135 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 BPNT1O95861 308 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 ZBTB25P24278 435 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 LIMK1P53667 647 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 TUSC2O75896 110 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms