RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 SH2D1BO14796 132 aa23.08■■□□□ 1.28
CTDNEP1-201ENST00000318988 KNG1P01042 644 aa23.08■■□□□ 1.28
CTDNEP1-201ENST00000318988 EGR1P18146 543 aa23.08■■□□□ 1.28
CTDNEP1-201ENST00000318988 DUSP1P28562 367 aa23.08■■□□□ 1.28
CTDNEP1-201ENST00000318988 PYDC2Q56P42 97 aa23.08■■□□□ 1.28
CTDNEP1-201ENST00000318988 Q6ZTK2 550 aa23.08■■□□□ 1.28
CTDNEP1-201ENST00000318988 OR14J1Q9UGF5 321 aa23.08■■□□□ 1.28
CTDNEP1-201ENST00000318988 RAI1Q7Z5J4 1906 aaPredicted RBP23.08■■□□□ 1.28
CTDNEP1-201ENST00000318988 CACNA1DQ01668 2161 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 A0A0G2JMP0 313 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 A0A0X1KG70 313 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 C3orf80F5H4A9 247 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 TMEM178BH3BS89 294 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 TPPPO94811 219 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 CD80P33681 288 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 ARL6IP1Q15041 203 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 MICBQ29980 383 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 NKAPLQ5M9Q1 402 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 ATAD3CQ5T2N8 411 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 TGIF2LYQ8IUE0 185 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 SNX29P2Q8IUI4 249 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 OR4M2Q8NGB6 313 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 SOSTQ9BQB4 213 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 PLEKHJ1Q9NW61 149 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 NLKQ9UBE8 527 aa23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 USP9YO00507 2555 aaPredicted RBP23.07■■□□□ 1.28
CTDNEP1-201ENST00000318988 HRNRQ86YZ3 2850 aaPredicted RBP23.06■■□□□ 1.28
CTDNEP1-201ENST00000318988 OVOL3O00110 214 aa23.06■■□□□ 1.28
CTDNEP1-201ENST00000318988 DEGS1O15121 323 aa23.06■■□□□ 1.28
CTDNEP1-201ENST00000318988 INHBBP09529 407 aa23.06■■□□□ 1.28
CTDNEP1-201ENST00000318988 DAOP14920 347 aa23.06■■□□□ 1.28
CTDNEP1-201ENST00000318988 MRPS11P82912 194 aaKnown RBP23.06■■□□□ 1.28
CTDNEP1-201ENST00000318988 ZNF146Q15072 292 aa23.06■■□□□ 1.28
CTDNEP1-201ENST00000318988 PDCD1Q15116 288 aa23.06■■□□□ 1.28
CTDNEP1-201ENST00000318988 ZNF787Q6DD87 383 aa23.06■■□□□ 1.28
CTDNEP1-201ENST00000318988 SFRP4Q6FHJ7 346 aaPredicted RBP23.06■■□□□ 1.28
CTDNEP1-201ENST00000318988 SPACA1Q9HBV2 294 aa23.06■■□□□ 1.28
CTDNEP1-201ENST00000318988 CHD3Q12873 2000 aaKnown RBP23.06■■□□□ 1.28
CTDNEP1-201ENST00000318988 ZNF44P15621 663 aa23.05■■□□□ 1.28
CTDNEP1-201ENST00000318988 FUT3P21217 361 aa23.05■■□□□ 1.28
CTDNEP1-201ENST00000318988 RBMXP38159 391 aaKnown RBP23.05■■□□□ 1.28
CTDNEP1-201ENST00000318988 PTH2RP49190 550 aa23.05■■□□□ 1.28
CTDNEP1-201ENST00000318988 HOXA4Q00056 320 aaPredicted RBP23.05■■□□□ 1.28
CTDNEP1-201ENST00000318988 CDNFQ49AH0 187 aa23.05■■□□□ 1.28
CTDNEP1-201ENST00000318988 PEG10Q86TG7 708 aaKnown RBP23.05■■□□□ 1.28
CTDNEP1-201ENST00000318988 SEH1LQ96EE3 360 aa23.05■■□□□ 1.28
CTDNEP1-201ENST00000318988 ARHGAP5-AS1Q96IT6 56 aa23.05■■□□□ 1.28
CTDNEP1-201ENST00000318988 WIPI2Q9Y4P8 454 aa23.05■■□□□ 1.28
CTDNEP1-201ENST00000318988 PDCD6O75340 191 aa23.04■■□□□ 1.28
CTDNEP1-201ENST00000318988 HAND1O96004 215 aa23.04■■□□□ 1.28
CTDNEP1-201ENST00000318988 F12P00748 615 aaPredicted RBP23.04■■□□□ 1.28
CTDNEP1-201ENST00000318988 COL8A2P25067 703 aa23.04■■□□□ 1.28
CTDNEP1-201ENST00000318988 EFNA4P52798 201 aa23.04■■□□□ 1.28
CTDNEP1-201ENST00000318988 FAM201AQ5SY85 155 aa23.04■■□□□ 1.28
CTDNEP1-201ENST00000318988 ZMAT3Q9HA38 289 aaKnown RBP23.04■■□□□ 1.28
CTDNEP1-201ENST00000318988 DCAF16Q9NXF7 216 aa23.04■■□□□ 1.28
CTDNEP1-201ENST00000318988 UTP20O75691 2785 aaKnown RBP23.04■■□□□ 1.28
CTDNEP1-201ENST00000318988 PPIAL4EA0A075B759 164 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 IGHV3OR15-7A0A075B7D8 119 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 TRAV38-1A0A0B4J264 116 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 OOEPA6NGQ2 149 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 RFPL4AA6NLU0 287 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 OR2AT4A6NND4 320 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 PPIAL4DF5H284 164 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 RFPL4AL1F8VTS6 287 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 PPIAL4FP0DN26 164 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 MUC1P15941 1255 aaPredicted RBP23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 HIST1H1DP16402 221 aaKnown RBP23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 GNB3P16520 340 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 PPP5CP53041 499 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 TMEM50BP56557 158 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 C19orf18Q8NEA5 215 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 YIPF5Q969M3 257 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 ABHD1Q96SE0 405 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 AUNIPQ9H7T9 357 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 EDARQ9UNE0 448 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 PPIAL4AQ9Y536 164 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 DSCAMO60469 2012 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 LYNX1G3V0Z9 82 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 LGALS8O00214 317 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 ZNF205O95201 554 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 HLA-DQB1P01920 261 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 GSTP1P09211 210 aaKnown RBP23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 LYNX1P0DP58 116 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 CD40LGP29965 261 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 ZNF79Q15937 498 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 SIGIRRQ6IA17 410 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 GDPD1Q8N9F7 314 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 DEFB108BQ8NET1 73 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 OR5T2Q8NGG2 359 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 PECRQ9BY49 303 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 HSF4Q9ULV5 492 aa23.03■■□□□ 1.28
CTDNEP1-201ENST00000318988 DOPEY2Q9Y3R5 2298 aa23.02■■□□□ 1.28
CTDNEP1-201ENST00000318988 DYSFO75923 2080 aa23.02■■□□□ 1.28
CTDNEP1-201ENST00000318988 FOXI3A8MTJ6 420 aaPredicted RBP23.02■■□□□ 1.28
CTDNEP1-201ENST00000318988 LY6HO94772 140 aa23.02■■□□□ 1.28
CTDNEP1-201ENST00000318988 OR2H2O95918 312 aa23.02■■□□□ 1.28
CTDNEP1-201ENST00000318988 PSG2P11465 335 aa23.02■■□□□ 1.28
CTDNEP1-201ENST00000318988 CHATP28329 748 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms