RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 COX6A1P12074 109 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 LCN15Q6UWW0 184 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 MFSD4AQ8N468 514 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 ABHD17AQ96GS6 310 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 ADGRG7Q96K78 797 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 PFDN5Q99471 154 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 HEXA-AS1Q9H8Q6 139 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 HEATR5BQ9P2D3 2071 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 CYTIPO60759 359 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 ACOT6Q3I5F7 207 aaPredicted RBP11.88□□□□□ -0.51
RFFL-201ENST00000315249 OIT3Q8WWZ8 545 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 CNTD2Q9H8S5 307 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 TMEFF2Q9UIK5 374 aaPredicted RBP11.88□□□□□ -0.51
RFFL-201ENST00000315249 RALGAPA2Q2PPJ7 1873 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 TRAV1-2A0A0B4J238 106 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 TMEM272A0A1B0GTI8 110 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 SOX15O60248 233 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 RHOBP62745 196 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 ZNF486Q96H40 463 aaPredicted RBP11.88□□□□□ -0.51
RFFL-201ENST00000315249 RNF165Q6ZSG1 346 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 ACOT7LQ6ZUV0 252 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 MED9Q9NWA0 146 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 PTPRFP10586 1907 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 C9orf172C9J069 976 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 IGKV1D-16P01601 117 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 C1QAP02745 245 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 JUNBP17275 347 aaPredicted RBP11.88□□□□□ -0.51
RFFL-201ENST00000315249 M6PRP20645 277 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 OR4D11Q8NGI4 311 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 IL11P20809 199 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 KDF1Q8NAX2 398 aaPredicted RBP11.88□□□□□ -0.51
RFFL-201ENST00000315249 THYN1Q9P016 225 aa11.88□□□□□ -0.51
RFFL-201ENST00000315249 LY6DQ14210 128 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 SLC25A30Q5SVS4 291 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 FAM122CQ6P4D5 195 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 MS4A3Q96HJ5 214 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 AK3Q9UIJ7 227 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 NAT2P11245 290 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 LSMEM1Q8N8F7 131 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 LINC01560Q8TB33 94 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 GREB1LQ9C091 1923 aaPredicted RBP11.87□□□□□ -0.51
RFFL-201ENST00000315249 UBE2L5PA0A1B0GUS4 154 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 S100A4P26447 101 aaKnown RBP11.87□□□□□ -0.51
RFFL-201ENST00000315249 RNF141Q8WVD5 230 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 HSD17B10Q99714 261 aaKnown RBP11.87□□□□□ -0.51
RFFL-201ENST00000315249 PILRAQ9UKJ1 303 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 RFPL4AA6NLU0 287 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 RFPL4AL1F8VTS6 287 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 K7ESF4 209 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 OIP5O43482 229 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 ZNF354AO60765 605 aaPredicted RBP11.87□□□□□ -0.51
RFFL-201ENST00000315249 C17orf47Q8NEP4 570 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 PLSCR3Q9NRY6 295 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 SLC25A10Q9UBX3 287 aaPredicted RBP11.87□□□□□ -0.51
RFFL-201ENST00000315249 SULT1A3P0DMM9 295 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 SULT1A4P0DMN0 295 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 PIMREGQ9BSJ6 248 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 PIGMQ9H3S5 423 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 NTN4Q9HB63 628 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 DOPEY2Q9Y3R5 2298 aa11.87□□□□□ -0.51
RFFL-201ENST00000315249 PPIAL4EA0A075B759 164 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 PPIAL4DF5H284 164 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 NME2P1O60361 137 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 PPIAL4FP0DN26 164 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 KCNJ3P48549 501 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 KCNRGQ8N5I3 272 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 TVP23CQ96ET8 276 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 PPIAL4AQ9Y536 164 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 ACSM4P0C7M7 580 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 MCCD1P59942 119 aaPredicted RBP11.86□□□□□ -0.51
RFFL-201ENST00000315249 OR4E1P0C645 316 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 SMIM17P0DL12 118 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 LPAR6P43657 344 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 PRR27Q6MZM9 219 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 LRRTM1Q86UE6 522 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 ACTR3CQ9C0K3 210 aaPredicted RBP11.86□□□□□ -0.51
RFFL-201ENST00000315249 CES1P1Q9UKY3 287 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 SMPD2O60906 423 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 PDCD6O75340 191 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 H2AFB1P0C5Y9 115 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 OR13C7P0DN81 318 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 MOB1BQ7L9L4 216 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 OR4C16Q8NGL9 310 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 DYNLRB2Q8TF09 96 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 TMEM147Q9BVK8 224 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 DUSP21Q9H596 190 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 ZNF646O15015 1829 aaPredicted RBP11.86□□□□□ -0.51
RFFL-201ENST00000315249 CACNA1DQ01668 2161 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 TGIF2Q9GZN2 237 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 PTHLHP12272 177 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 SOHLH1Q5JUK2 328 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 ZNF788Q6ZQV5 615 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 OR10AC1Q8NH08 325 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 FAM210AQ96ND0 272 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 WDR13Q9H1Z4 485 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 FKBP11Q9NYL4 201 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 CACFD1Q9UGQ2 172 aa11.86□□□□□ -0.51
RFFL-201ENST00000315249 NUPL2O15504 423 aaKnown RBP11.85□□□□□ -0.51
RFFL-201ENST00000315249 ZNF883P0CG24 379 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 HTN1P15515 57 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 684.7 ms