RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ABCA7Q8IZY2 2146 aa11.7□□□□□ -0.54
SKA3-202ENST00000314759 IGLV3-12A0A075B6K2 115 aa11.7□□□□□ -0.54
SKA3-202ENST00000314759 ATXN7O15265 892 aaPredicted RBP11.7□□□□□ -0.54
SKA3-202ENST00000314759 CHAF1BQ13112 559 aa11.7□□□□□ -0.54
SKA3-202ENST00000314759 ZNF674Q2M3X9 581 aa11.7□□□□□ -0.54
SKA3-202ENST00000314759 DBX2Q6ZNG2 339 aa11.7□□□□□ -0.54
SKA3-202ENST00000314759 SYT13Q7L8C5 426 aa11.7□□□□□ -0.54
SKA3-202ENST00000314759 FAM213BQ8TBF2 198 aa11.7□□□□□ -0.54
SKA3-202ENST00000314759 Q8WTZ3 238 aa11.7□□□□□ -0.54
SKA3-202ENST00000314759 DYRK2Q92630 601 aa11.7□□□□□ -0.54
SKA3-202ENST00000314759 ABHD14AQ9BUJ0 271 aa11.7□□□□□ -0.54
SKA3-202ENST00000314759 NELFAQ9H3P2 528 aa11.7□□□□□ -0.54
SKA3-202ENST00000314759 MYOTQ9UBF9 498 aa11.7□□□□□ -0.54
SKA3-202ENST00000314759 STRAPQ9Y3F4 350 aaKnown RBP11.7□□□□□ -0.54
SKA3-202ENST00000314759 CCDC187A0A096LP49 1063 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 LOC102725191A0A1B0GVB3 256 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 SPRY1O43609 319 aaPredicted RBP11.69□□□□□ -0.54
SKA3-202ENST00000314759 TLX3O43711 291 aaPredicted RBP11.69□□□□□ -0.54
SKA3-202ENST00000314759 SOD3P08294 240 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 LTBRP36941 435 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 GUCA1AP43080 201 aaPredicted RBP11.69□□□□□ -0.54
SKA3-202ENST00000314759 RAB1AP62820 205 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 GAMTQ14353 236 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 HAGHQ16775 308 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 SNAI3Q3KNW1 292 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 Q3ZCU0 254 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 RHBDD2Q6NTF9 364 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 BRICD5Q6PL45 260 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 TMEM182Q6ZP80 229 aaPredicted RBP11.69□□□□□ -0.54
SKA3-202ENST00000314759 Q6ZSR3 168 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 HIST2H3AQ71DI3 136 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 LRTM2Q8N967 370 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 S100PBPQ96BU1 408 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 MSI2Q96DH6 328 aaKnown RBP11.69□□□□□ -0.54
SKA3-202ENST00000314759 PRO1933Q9H354 126 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 SLC2A9Q9NRM0 540 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 HS3ST3B1Q9Y662 390 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 NSG1A0A0A6YYJ2 146 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 M0R135 149 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 PIAS2O75928 621 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 CD63P08962 238 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 NDUFB7P17568 137 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 OTX1P32242 354 aaPredicted RBP11.69□□□□□ -0.54
SKA3-202ENST00000314759 CSNK1A1P48729 337 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 LIAT1Q6ZQX7 453 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 C20orf196Q8IYI0 205 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 SUMF2Q8NBJ7 301 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 OR5L1Q8NGL2 311 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 NABP1Q96AH0 204 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 ZNF799Q96GE5 643 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 PBDC1Q9BVG4 233 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 WDR87Q6ZQQ6 2873 aa11.69□□□□□ -0.54
SKA3-202ENST00000314759 TGIF2-C20orf24A0A0A6YYL0 155 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 C2CD4DB7Z1M9 353 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 HIST1H2BKO60814 126 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 TIAF1O95411 115 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 HIST1H2BJP06899 126 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 HIST1H1BP16401 226 aaKnown RBP11.68□□□□□ -0.54
SKA3-202ENST00000314759 HIST1H2BOP23527 126 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 CHATP28329 748 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 DUSP1P28562 367 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 HIST1H2BBP33778 126 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 HIST1H2BDP58876 126 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 ERVFRD-1P60508 538 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 HIST1H2BCP62807 126 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 HIST2H2BEQ16778 126 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 NKAIN1Q4KMZ8 207 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.68□□□□□ -0.54
SKA3-202ENST00000314759 FBXW12Q6X9E4 464 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 SSX9Q7RTT3 188 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 OR5L2Q8NGL0 311 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 OR11L1Q8NGX0 322 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 HIST1H2BHQ93079 126 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 SGK3Q96BR1 496 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 HIST1H2BNQ99877 126 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 HIST1H2BMQ99879 126 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 SUCNR1Q9BXA5 334 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 IGKV1-27A0A075B6S5 117 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 FAM221AA4D161 298 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 H3BQ15 152 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 ST8SIA3O43173 380 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 NXPH1P58417 271 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 IL13RA2Q14627 380 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 ELOBQ15370 118 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 RSU1Q15404 277 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 ZNF610Q8N9Z0 462 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 RAB39BQ96DA2 213 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 ZNF385AQ96PM9 386 aaKnown RBP11.68□□□□□ -0.54
SKA3-202ENST00000314759 METTL9Q9H1A3 318 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 HSF4Q9ULV5 492 aa11.68□□□□□ -0.54
SKA3-202ENST00000314759 FAM230AA0A1W2PPH8 454 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 H0YL77 283 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 K7N7A8 449 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 DTYMKP23919 212 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 PRSS12P56730 875 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 OR2AE1Q8NHA4 323 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 C10orf35Q96D05 121 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 GFOD1Q9NXC2 390 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 TAGLN2P37802 199 aaKnown RBP11.67□□□□□ -0.54
SKA3-202ENST00000314759 RBP2P50120 134 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms