RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 SP3Q02447 781 aa10.91□□□□□ -0.66
EBF1-201ENST00000313708 TMEM176BQ3YBM2 270 aaPredicted RBP10.91□□□□□ -0.66
EBF1-201ENST00000313708 STPG1Q5TH74 334 aa10.91□□□□□ -0.66
EBF1-201ENST00000313708 C1QL3Q5VWW1 255 aa10.91□□□□□ -0.66
EBF1-201ENST00000313708 OR10S1Q8NGN2 331 aa10.91□□□□□ -0.66
EBF1-201ENST00000313708 PSMF1Q92530 271 aa10.91□□□□□ -0.66
EBF1-201ENST00000313708 SLC46A1Q96NT5 459 aa10.91□□□□□ -0.66
EBF1-201ENST00000313708 LAMTOR2Q9Y2Q5 125 aa10.91□□□□□ -0.66
EBF1-201ENST00000313708 C17orf112F2Z3M2 114 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 ITGB1BP1O14713 200 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 HLA-GP17693 338 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 HLA-DRB5Q30154 266 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 ABHD5Q8WTS1 349 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 ZFYVE21Q9BQ24 234 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 PSENENQ9NZ42 101 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 ZNF831Q5JPB2 1677 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 PRKNO60260 465 aaPredicted RBP10.9□□□□□ -0.66
EBF1-201ENST00000313708 ZNF735P0CB33 412 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 RPS4Y1P22090 263 aaKnown RBP10.9□□□□□ -0.66
EBF1-201ENST00000313708 CCL20P78556 96 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 MRPL58Q14197 206 aaKnown RBP10.9□□□□□ -0.66
EBF1-201ENST00000313708 OR2I1PQ8NGU4 316 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 OR10A5Q9H207 317 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 PRSS47A8MTI9 375 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 SERPINE3A8MV23 424 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 BLKP51451 505 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 ZNF506Q5JVG8 444 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 BRICD5Q6PL45 260 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 C6orf201Q7Z4U5 140 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 MRGPRGQ86SM5 289 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 BATF2Q8N1L9 274 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 TMEM156Q8N614 296 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 ZNF331Q9NQX6 463 aaPredicted RBP10.9□□□□□ -0.66
EBF1-201ENST00000313708 DNAJB12Q9NXW2 375 aaKnown RBP10.9□□□□□ -0.66
EBF1-201ENST00000313708 SRPK3Q9UPE1 567 aa10.9□□□□□ -0.66
EBF1-201ENST00000313708 OTOFQ9HC10 1997 aa10.9□□□□□ -0.67
EBF1-201ENST00000313708 SOCS4Q8WXH5 440 aa10.9□□□□□ -0.67
EBF1-201ENST00000313708 MOB3AQ96BX8 217 aa10.9□□□□□ -0.67
EBF1-201ENST00000313708 PARLQ9H300 379 aa10.9□□□□□ -0.67
EBF1-201ENST00000313708 OR7C2O60412 319 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 ZNF117Q03924 483 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 HDAC8Q9BY41 377 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 HRASLS2Q9NWW9 162 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 PITX3O75364 302 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 SRSF5Q13243 272 aaKnown RBP10.89□□□□□ -0.67
EBF1-201ENST00000313708 RTP5Q14D33 572 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 PCK2Q16822 640 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 NPSR1Q6W5P4 371 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 CADM4Q8NFZ8 388 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 ABHD14AQ9BUJ0 271 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 BRCA1P38398 1863 aaKnown RBP10.89□□□□□ -0.67
EBF1-201ENST00000313708 ZNF253O75346 499 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 ZNF43P17038 809 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 FAM174AQ8TBP5 190 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 MRPL30Q8TCC3 161 aaKnown RBP10.89□□□□□ -0.67
EBF1-201ENST00000313708 KTI12Q96EK9 354 aaPredicted RBP10.89□□□□□ -0.67
EBF1-201ENST00000313708 DAPP1Q9UN19 280 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 MELTFP08582 738 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 PVRP15151 417 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 BRS3P32247 399 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 CDKN3Q16667 212 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 VAX1Q5SQQ9 334 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 C9orf131Q5VYM1 1079 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 RSPO2Q6UXX9 243 aaPredicted RBP10.89□□□□□ -0.67
EBF1-201ENST00000313708 LIAT1Q6ZQX7 453 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 H1FOOQ8IZA3 346 aaPredicted RBP10.89□□□□□ -0.67
EBF1-201ENST00000313708 ZNRF4Q8WWF5 429 aa10.89□□□□□ -0.67
EBF1-201ENST00000313708 PINX1Q96BK5 328 aaKnown RBP10.89□□□□□ -0.67
EBF1-201ENST00000313708 ABHD16AO95870 558 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 OPN1LWP04000 364 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 SRP14P37108 136 aaKnown RBP10.88□□□□□ -0.67
EBF1-201ENST00000313708 TGFBR3Q03167 851 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 Q56UQ5 140 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 RNF2Q99496 336 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 ZPBPQ9BS86 351 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 MPZL1O95297 269 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 ADH5P11766 374 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 PTGER4P35408 488 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 PDLIM3Q53GG5 364 aaPredicted RBP10.88□□□□□ -0.67
EBF1-201ENST00000313708 SPRED2Q7Z698 418 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 SLC39A11Q8N1S5 342 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 NEIL1Q96FI4 390 aaPredicted RBP10.88□□□□□ -0.67
EBF1-201ENST00000313708 AMELYQ99218 206 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 PCED1AQ9H1Q7 454 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 NIT1Q86X76 327 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 OR1N1Q8NGS0 311 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 S1PR5Q9H228 398 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 KLRF1Q9NZS2 232 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 SPAG17Q6Q759 2223 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 MYLKQ15746 1914 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 NYNRINQ9P2P1 1898 aaKnown RBP10.88□□□□□ -0.67
EBF1-201ENST00000313708 LOC102723971A0A1B0GUV8 181 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 A0A1B0GV72 72 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 NKX2-6A6NCS4 301 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 GAGE10A6NGK3 116 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 LRRC3CA6NJW4 275 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 ICAM4Q14773 271 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 HIST3H3Q16695 136 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 FAM78AQ5JUQ0 283 aa10.88□□□□□ -0.67
EBF1-201ENST00000313708 PRAMEF20Q5VT98 475 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms