RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 FAM90A8PA6NJQ4 464 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 ANGPTL7O43827 346 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 CLIC3O95833 236 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 FADS2O95864 444 aaKnown RBP16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 HAND1O96004 215 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 PRKACBP22694 351 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 POU3F4P49335 361 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 BMXP51813 675 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 MTCP1P56278 107 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 LPCAT4Q643R3 524 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 XAF1Q6GPH4 301 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 LHFPL2Q6ZUX7 228 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 ASCC1Q8N9N2 400 aaKnown RBP16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 ZNF555Q8NEP9 628 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 OR13C9Q8NGT0 318 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 PIFOQ8TCI5 191 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 EMG1Q92979 244 aaKnown RBP16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 SNX22Q96L94 193 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 SPACA5Q96QH8 159 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 MYCBPQ99417 103 aaPredicted RBP16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 CITED1Q99966 193 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 PDCD1LG2Q9BQ51 273 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 NOTCH1P46531 2555 aa16.1■□□□□ 0.17
PDZRN3-202ENST00000308537 ODF3BA8MYP8 253 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 TSPAN9O75954 239 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 KDM4BO94953 1096 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 ALX3O95076 343 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 CRYBA1P05813 215 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 DUSP1P28562 367 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 GTF2A1P52655 376 aaPredicted RBP16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 ZP1P60852 638 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 ZNF691Q5VV52 312 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 ZNF529Q6P280 563 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 ZNF782Q6ZMW2 699 aaPredicted RBP16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 GDPGP1Q6ZNW5 385 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 Q8IYB0 196 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 FAM58AQ8N1B3 248 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 DYNAPQ8N1N2 210 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 PARP16Q8N5Y8 322 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 OR13C3Q8NGS6 347 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 RFT1Q96AA3 541 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 C16orf95Q9H693 158 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 HMG20AQ9NP66 347 aa16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 RPL36Q9Y3U8 105 aaKnown RBP16.09■□□□□ 0.17
PDZRN3-202ENST00000308537 CLPXO76031 633 aa16.08■□□□□ 0.16
PDZRN3-202ENST00000308537 ZNF728P0DKX0 622 aa16.08■□□□□ 0.16
PDZRN3-202ENST00000308537 CALCBP10092 127 aa16.08■□□□□ 0.16
PDZRN3-202ENST00000308537 ZNF20P17024 532 aa16.08■□□□□ 0.16
PDZRN3-202ENST00000308537 OR3A1P47881 315 aa16.08■□□□□ 0.16
PDZRN3-202ENST00000308537 RCN1Q15293 331 aa16.08■□□□□ 0.16
PDZRN3-202ENST00000308537 PACRGLQ8N7B6 248 aa16.08■□□□□ 0.16
PDZRN3-202ENST00000308537 ZNF676Q8N7Q3 588 aa16.08■□□□□ 0.16
PDZRN3-202ENST00000308537 TPRX1Q8N7U7 411 aa16.08■□□□□ 0.16
PDZRN3-202ENST00000308537 OR4S1Q8NGB4 309 aa16.08■□□□□ 0.16
PDZRN3-202ENST00000308537 OR5R1Q8NH85 324 aa16.08■□□□□ 0.16
PDZRN3-202ENST00000308537 ZCCHC4Q9H5U6 513 aa16.08■□□□□ 0.16
PDZRN3-202ENST00000308537 HEXA-AS1Q9H8Q6 139 aa16.08■□□□□ 0.16
PDZRN3-202ENST00000308537 TMEM212A6NML5 194 aa16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 RBP4P02753 201 aa16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 COX7A1P24310 79 aa16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 ADARB1P78563 741 aaKnown RBP16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 AANATQ16613 207 aa16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 LHFPL4Q7Z7J7 247 aa16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 OR5D18Q8NGL1 313 aa16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 PPP1R35Q8TAP8 253 aa16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 CNIH3Q8TBE1 160 aa16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 MRPL48Q96GC5 212 aaKnown RBP16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 SSX3Q99909 188 aa16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 CHST6Q9GZX3 395 aa16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 COMMD4Q9H0A8 199 aa16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 VCXQ9H320 206 aa16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 RNF114Q9Y508 228 aa16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 SIRT4Q9Y6E7 314 aaPredicted RBP16.07■□□□□ 0.16
PDZRN3-202ENST00000308537 A0A1W2PPH5 198 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 H3BUX3 64 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 PAHP00439 452 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 LALBAP00709 142 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 IGHV1-8P0DP01 117 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 PRKACAP17612 351 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 LMO1P25800 156 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 PEX2P28328 305 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 ETV1P50549 477 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 EDDM3BP56851 147 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 MEF2CQ06413 473 aaPredicted RBP16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 MRPL28Q13084 256 aaKnown RBP16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 KLHL22Q53GT1 634 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 SPIN3Q5JUX0 258 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 ZNF626Q68DY1 528 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 LAIR2Q6ISS4 152 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 Q6P435 159 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 ZNF485Q8NCK3 441 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 OR11H6Q8NGC7 330 aa16.06■□□□□ 0.16
PDZRN3-202ENST00000308537 IL18R1Q13478 541 aa16.05■□□□□ 0.16
PDZRN3-202ENST00000308537 CDK5R1Q15078 307 aa16.05■□□□□ 0.16
PDZRN3-202ENST00000308537 LRRC36Q1X8D7 754 aa16.05■□□□□ 0.16
PDZRN3-202ENST00000308537 LRRC75BQ2VPJ9 315 aa16.05■□□□□ 0.16
PDZRN3-202ENST00000308537 OR2G6Q5TZ20 316 aa16.05■□□□□ 0.16
PDZRN3-202ENST00000308537 GDPD3Q7L5L3 318 aa16.05■□□□□ 0.16
PDZRN3-202ENST00000308537 SAXO1Q8IYX7 474 aa16.05■□□□□ 0.16
PDZRN3-202ENST00000308537 OR51A2Q8NGJ7 313 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms