RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PPP1R32Q7Z5V6 425 aa9.4□□□□□ -0.9
SYNPO2-201ENST00000307142 C15orf54Q8N8G6 183 aa9.4□□□□□ -0.9
SYNPO2-201ENST00000307142 SFT2D1Q8WV19 159 aa9.4□□□□□ -0.9
SYNPO2-201ENST00000307142 SIGLEC12Q96PQ1 595 aa9.4□□□□□ -0.9
SYNPO2-201ENST00000307142 OR2V2Q96R30 315 aa9.4□□□□□ -0.9
SYNPO2-201ENST00000307142 FABP7O15540 132 aa9.4□□□□□ -0.9
SYNPO2-201ENST00000307142 OR2W3Q7Z3T1 314 aa9.4□□□□□ -0.9
SYNPO2-201ENST00000307142 APH1BQ8WW43 257 aa9.4□□□□□ -0.9
SYNPO2-201ENST00000307142 SCARF2Q96GP6 870 aaPredicted RBP9.4□□□□□ -0.9
SYNPO2-201ENST00000307142 GRAMD2BQ96HH9 432 aa9.4□□□□□ -0.9
SYNPO2-201ENST00000307142 PRELID1Q9Y255 219 aa9.4□□□□□ -0.9
SYNPO2-201ENST00000307142 IGLV3-19P01714 112 aa9.4□□□□□ -0.91
SYNPO2-201ENST00000307142 ERGP11308 486 aa9.4□□□□□ -0.91
SYNPO2-201ENST00000307142 ACAA2P42765 397 aaKnown RBP9.4□□□□□ -0.91
SYNPO2-201ENST00000307142 RHOBP62745 196 aa9.4□□□□□ -0.91
SYNPO2-201ENST00000307142 OR5R1Q8NH85 324 aa9.4□□□□□ -0.91
SYNPO2-201ENST00000307142 CNTD2Q9H8S5 307 aa9.4□□□□□ -0.91
SYNPO2-201ENST00000307142 RFPL4AA6NLU0 287 aa9.4□□□□□ -0.91
SYNPO2-201ENST00000307142 RFPL4AL1F8VTS6 287 aa9.4□□□□□ -0.91
SYNPO2-201ENST00000307142 FGF2P09038 288 aa9.4□□□□□ -0.91
SYNPO2-201ENST00000307142 KDF1Q8NAX2 398 aaPredicted RBP9.4□□□□□ -0.91
SYNPO2-201ENST00000307142 TMEM147Q9BVK8 224 aa9.4□□□□□ -0.91
SYNPO2-201ENST00000307142 RNF24Q9Y225 148 aa9.4□□□□□ -0.91
SYNPO2-201ENST00000307142 ACKR3P25106 362 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 SLC25A30Q5SVS4 291 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 ETFRF1Q6IPR1 90 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 MFSD4AQ8N468 514 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 BOLA2-SMG1P6H3BVE0 249 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 OIP5O43482 229 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 VWCEQ96DN2 955 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 PARP12Q9H0J9 701 aaKnown RBP9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 SNRNP70P08621 437 aaKnown RBP9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 APELAP0DMC3 54 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 SULT1A3P0DMM9 295 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 SULT1A4P0DMN0 295 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 GP2P55259 537 aaKnown RBP9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 UNQ6494/PRO21346Q6UXR6 183 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 OR4D11Q8NGI4 311 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 RTN4IP1Q8WWV3 396 aaPredicted RBP9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 MS4A3Q96HJ5 214 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 TOX4O94842 621 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 SMIM17P0DL12 118 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 COL10A1Q03692 680 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 C1orf174Q8IYL3 243 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 LPAR3Q9UBY5 353 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 VWA8A3KMH1 1905 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 A0A1W2PN81 502 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 CHRNA7P36544 502 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 UBE2KP61086 200 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 ECSCRQ19T08 205 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 SLA2Q9H6Q3 261 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 ELOVL5Q9NYP7 299 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 HILPDAQ9Y5L2 63 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 ADGRG7Q96K78 797 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 AAMDCQ9H7C9 122 aa9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 EXOGQ9Y2C4 368 aaKnown RBP9.39□□□□□ -0.91
SYNPO2-201ENST00000307142 LRRC3CA6NJW4 275 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 ZFPL1O95159 310 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 LPAR6P43657 344 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 MRPS11P82912 194 aaKnown RBP9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 OR52L2PQ8NGH6 319 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 ZNF519Q8TB69 540 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 IGKV3-7A0A075B6H7 116 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 SMLR1H3BR10 107 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 PDCD6O75340 191 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 ERVFRD-1P60508 538 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 RPL31P62899 125 aaKnown RBP9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 USF2Q15853 346 aaPredicted RBP9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 SHISA5Q8N114 240 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 IL5P05113 134 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 NDUFA6P56556 154 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 ZBTB37Q5TC79 503 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 SLC7A10Q9NS82 523 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 UBE2L5PA0A1B0GUS4 154 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 ACSM4P0C7M7 580 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 AUNIPQ9H7T9 357 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 ZDHHC8Q9ULC8 765 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 CD59P13987 128 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 JUNBP17275 347 aaPredicted RBP9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 MCCD1P59942 119 aaPredicted RBP9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 AESQ08117 197 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 ALKAL2Q6UX46 152 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 CA10Q9NS85 328 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 TMEFF2Q9UIK5 374 aaPredicted RBP9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 FOXD3Q9UJU5 478 aaPredicted RBP9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 DNAJC13O75165 2243 aa9.38□□□□□ -0.91
SYNPO2-201ENST00000307142 HIST1H1DP16402 221 aaKnown RBP9.37□□□□□ -0.91
SYNPO2-201ENST00000307142 PTBP1P26599 531 aaKnown RBP eCLIP9.37□□□□□ -0.91
SYNPO2-201ENST00000307142 SNRPNP63162 240 aaKnown RBP9.37□□□□□ -0.91
SYNPO2-201ENST00000307142 ADIPOR1Q96A54 375 aa9.37□□□□□ -0.91
SYNPO2-201ENST00000307142 HSD17B10Q99714 261 aaKnown RBP9.37□□□□□ -0.91
SYNPO2-201ENST00000307142 ACTR3CQ9C0K3 210 aaPredicted RBP9.37□□□□□ -0.91
SYNPO2-201ENST00000307142 ICE1Q9Y2F5 2266 aa9.37□□□□□ -0.91
SYNPO2-201ENST00000307142 ONECUT2O95948 504 aa9.37□□□□□ -0.91
SYNPO2-201ENST00000307142 TGFBR1P36897 503 aa9.37□□□□□ -0.91
SYNPO2-201ENST00000307142 MAGEB1P43366 347 aa9.37□□□□□ -0.91
SYNPO2-201ENST00000307142 CCL13Q99616 98 aa9.37□□□□□ -0.91
SYNPO2-201ENST00000307142 SPSB2Q99619 263 aa9.37□□□□□ -0.91
SYNPO2-201ENST00000307142 MS4A18H0YCH9 400 aa9.37□□□□□ -0.91
SYNPO2-201ENST00000307142 MS4A18Q3C1V0 323 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms