RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 HAND1O96004 215 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 FAM157CP0CG43 387 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CALCBP10092 127 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 COL10A1Q03692 680 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 UBE2UQ5VVX9 321 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 AWAT2Q6E213 333 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CMTM4Q8IZR5 234 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CD177Q8N6Q3 437 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 PPP1R35Q8TAP8 253 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 NANPQ8TBE9 248 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 PHYHIPQ92561 330 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 FAM234AQ9H0X4 552 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 HMG20AQ9NP66 347 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ONECUT1Q9UBC0 465 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 RPUSD1Q9UJJ7 312 aaKnown RBP9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ING4Q9UNL4 249 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TEP1Q99973 2627 aaKnown RBP9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TRBV23-1A0A0A0MS06 115 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 IGKV1-12A0A0C4DH73 117 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 KIR2DS1A0A191URI9 304 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 A0A1W2PPH5 198 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 MAGEA13PA6NCF6 341 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 F8VVB4 439 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 F8VWA3 439 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CCRL2O00421 344 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ZNF780AO75290 641 aaPredicted RBP9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SC5DO75845 299 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 HTR3BO95264 441 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 IFNA2P01563 188 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 IGKV1D-12P01611 117 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TK1P04183 234 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SFTPBP07988 381 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 PPIAL4GP0DN37 164 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ZNF44P15621 663 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 AMY2BP19961 511 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SERPINA2P20848 420 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 GABRR1P24046 479 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 MYL9P24844 172 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 PTGFRP43088 359 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 FGF12P61328 243 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 PAX2Q02962 417 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 GPR176Q14439 515 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 INSL4Q14641 139 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ZNF146Q15072 292 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 FAM27D1Q5T7N8 215 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 GLT8D1Q68CQ7 371 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 UNQ9370/PRO34162Q6UXP9 181 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 GDPD3Q7L5L3 318 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 RNF144BQ7Z419 303 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 C1QL2Q7Z5L3 287 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CDH26Q8IXH8 852 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 FAM185AQ8N0U4 392 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 FGFRL1Q8N441 504 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 MUL1Q969V5 352 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 FOXRED1Q96CU9 486 aaPredicted RBP9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SNX22Q96L94 193 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 NKX3-1Q99801 234 aaPredicted RBP9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 DCTN5Q9BTE1 182 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CNTD2Q9H8S5 307 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 NDUFB11Q9NX14 153 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 IL36RNQ9UBH0 155 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 METRNQ9UJH8 293 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 MRPS28Q9Y2Q9 187 aaKnown RBP9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 MAB21L2Q9Y586 359 aa9.11□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SONP18583 2426 aaKnown RBP9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 A0A087WXM4 84 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SIRPB1O00241 398 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 PIN1P1O15428 100 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CDRT1O95170 752 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 UCHL1P09936 223 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ADRA2CP18825 462 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SRMP19623 302 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CALRP27797 417 aaKnown RBP9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 DUSP1P28562 367 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 EDDM3BP56851 147 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 FABP5Q01469 135 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 PAX8Q06710 450 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 BLMHQ13867 455 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 IL13RA2Q14627 380 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 GRK1Q15835 563 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 NEDD8Q15843 81 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SSX1Q16384 188 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CRIP3Q6Q6R5 217 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 OR8H2Q8N162 312 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 OR5D13Q8NGL4 314 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 OR10K1Q8NGX5 313 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 C8orf46Q8TAG6 207 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TBC1D15Q8TC07 691 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 DMRTB1Q96MA1 342 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 NR1H4Q96RI1 486 aaPredicted RBP9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 UQCC2Q9BRT2 126 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 PCGF1Q9BSM1 259 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SEBOXQ9HB31 216 aaPredicted RBP9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 IL36GQ9NZH8 169 aa9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 FN1P02751 2386 aaKnown RBP9.1□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TRAV40A0A0B4J280 105 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 FUOMA2VDF0 154 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 K7N7A8 449 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 FCN3O75636 299 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TOX4O94842 621 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms