RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 ZNF718Q3SXZ3 478 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 IL22RA2Q969J5 263 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 SNX22Q96L94 193 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 ZFP64Q9NPA5 681 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 NUP214P35658 2090 aaPredicted RBP11.38□□□□□ -0.59
COL3A1-201ENST00000304636 CACNA1CQ13936 2221 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 VSIG8P0DPA2 414 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 RBPJQ06330 500 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 ZNF774Q6NX45 483 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 ZNRF4Q8WWF5 429 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 TOX3O15405 576 aaPredicted RBP11.37□□□□□ -0.59
COL3A1-201ENST00000304636 HLA-GP17693 338 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 GALNSP34059 522 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 DRD3P35462 400 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 GNG4P50150 75 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 PRDX4Q13162 271 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 NUFIP2Q7Z417 695 aaKnown RBP11.37□□□□□ -0.59
COL3A1-201ENST00000304636 MENTQ9BUN1 341 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 SLC45A2Q9UMX9 530 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 ZNF835Q9Y2P0 537 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 RRP8O43159 456 aaKnown RBP11.37□□□□□ -0.59
COL3A1-201ENST00000304636 CFDP00746 253 aaPredicted RBP11.37□□□□□ -0.59
COL3A1-201ENST00000304636 VDAC1P21796 283 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 AGFG1P52594 562 aaKnown RBP11.37□□□□□ -0.59
COL3A1-201ENST00000304636 NANOS3P60323 173 aaKnown RBP11.37□□□□□ -0.59
COL3A1-201ENST00000304636 EWSR1Q01844 656 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL3A1-201ENST00000304636 FAM74A3Q4VXF1 159 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 PUSL1Q8N0Z8 303 aaKnown RBP11.37□□□□□ -0.59
COL3A1-201ENST00000304636 OR10G3Q8NGC4 313 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 DEFB127Q9H1M4 99 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 KLK13Q9UKR3 277 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 LY75O60449 1722 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 OR5H15A6NDH6 313 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 CDS2O95674 445 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 NSUN5P2Q63ZY6 315 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 NRTNQ99748 197 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 WDR13Q9H1Z4 485 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 CES1P1Q9UKY3 287 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 SF3B6Q9Y3B4 125 aaKnown RBP11.37□□□□□ -0.59
COL3A1-201ENST00000304636 NGFP01138 241 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 ZNF32P17041 273 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 UBE2V2Q15819 145 aa11.37□□□□□ -0.59
COL3A1-201ENST00000304636 PTTG1IPP53801 180 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 RPS16P62249 146 aaKnown RBP11.36□□□□□ -0.59
COL3A1-201ENST00000304636 NHLRC3Q5JS37 347 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 NHLRC2Q8NBF2 726 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 RGP1Q92546 391 aaPredicted RBP11.36□□□□□ -0.59
COL3A1-201ENST00000304636 IP6K3Q96PC2 410 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 PRSS27Q9BQR3 290 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 ADAT1Q9BUB4 502 aaKnown RBP11.36□□□□□ -0.59
COL3A1-201ENST00000304636 CYR61O00622 381 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 CDK2AP1O14519 115 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 SYNGR2O43760 224 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 PIAS2O75928 621 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 ITGBL1O95965 494 aaPredicted RBP11.36□□□□□ -0.59
COL3A1-201ENST00000304636 GABRG2P18507 467 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 USF1P22415 310 aaPredicted RBP11.36□□□□□ -0.59
COL3A1-201ENST00000304636 SULT1A2P50226 295 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 Q3ZCU0 254 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 TSPO2Q5TGU0 170 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 BET1LQ9NYM9 111 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 IGHV5-51A0A0C4DH38 117 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 CHST1O43916 411 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 HRASP01112 189 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 MUC1P15941 1255 aaPredicted RBP11.36□□□□□ -0.59
COL3A1-201ENST00000304636 CTGFP29279 349 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 LSM6P62312 80 aaKnown RBP11.36□□□□□ -0.59
COL3A1-201ENST00000304636 RHOBP62745 196 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 ZNF154Q13106 437 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 SKP2Q13309 424 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 COTL1Q14019 142 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 HES1Q14469 280 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 ZAR1Q86SH2 424 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 LINC00518Q8N0U6 118 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 OR11H4Q8NGC9 324 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 OR1L3Q8NH93 324 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 FAM74A7A6NL05 159 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 F12P00748 615 aaPredicted RBP11.36□□□□□ -0.59
COL3A1-201ENST00000304636 RNASEKQ6P5S7 137 aaKnown RBP11.36□□□□□ -0.59
COL3A1-201ENST00000304636 ANKRD37Q7Z713 158 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 RNF133Q8WVZ7 376 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 PGLYRP3Q96LB9 341 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 NDFIP1Q9BT67 221 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 TMEM9BQ9NQ34 198 aa11.36□□□□□ -0.59
COL3A1-201ENST00000304636 MMP16P51512 607 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 GNB1P62873 340 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 C1QL3Q5VWW1 255 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 DPPA3Q6W0C5 159 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 HOGA1Q86XE5 327 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 CPEB3Q8NE35 698 aaKnown RBP11.35□□□□□ -0.59
COL3A1-201ENST00000304636 HLA-CQ95604 372 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 ANGPTL4Q9BY76 406 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 LOC102723971A0A1B0GUV8 181 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 M0R1X1 148 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 TNFSF14O43557 240 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 BGLAPP02818 100 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 CRISP2P16562 243 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 SLC2A9Q9NRM0 540 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 METTL12A8MUP2 240 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 CRYAAP02489 173 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms