RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 Q8NFD4 153 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 SDSLQ96GA7 329 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 C1orf159Q96HA4 380 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 SSBP3Q9BWW4 388 aaPredicted RBP20.38■□□□□ 0.85
HOXC9-201ENST00000303450 LPAR2Q9HBW0 351 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 ABCA2Q9BZC7 2435 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 MALRD1Q5VYJ5 2156 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 F8P00451 2351 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 CSPG4Q6UVK1 2322 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 A0A1B0GW55 424 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 SIGLEC5O15389 551 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 HAND1O96004 215 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 UBBP0CG47 229 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 DUX4L2P0CJ85 424 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 DUX4L3P0CJ86 424 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 DUX4L4P0CJ87 422 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 DUX4L5P0CJ88 424 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 DUX4L6P0CJ89 424 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 DUX4L7P0CJ90 424 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 RAB11BQ15907 218 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 GPR107Q5VW38 600 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 DUX4L9Q6RFH8 374 aaPredicted RBP20.37■□□□□ 0.85
HOXC9-201ENST00000303450 ZNF841Q6ZN19 808 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 ANKRD13BQ86YJ7 626 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 OSR2Q8N2R0 312 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 MSI2Q96DH6 328 aaKnown RBP20.37■□□□□ 0.85
HOXC9-201ENST00000303450 DUX4Q9UBX2 424 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 ZANQ9Y493 2812 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 SMIM30A4D0T7 59 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 DVL1O14640 695 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 SH2D1BO14796 132 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 PHF1O43189 567 aaPredicted RBP20.37■□□□□ 0.85
HOXC9-201ENST00000303450 NDUFB3O43676 98 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 FOXH1O75593 365 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 CHRM2P08172 466 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 GTF2F2P13984 249 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 RANBP1P43487 201 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 NPY4RP50391 375 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 MXD1Q05195 221 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 LRRC10Q5BKY1 277 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 WDR25Q64LD2 544 aaPredicted RBP20.37■□□□□ 0.85
HOXC9-201ENST00000303450 ZNF561Q8N587 486 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 ZNRF1Q8ND25 227 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 C1orf147Q96MC9 270 aaPredicted RBP20.37■□□□□ 0.85
HOXC9-201ENST00000303450 MAB21L2Q9Y586 359 aa20.37■□□□□ 0.85
HOXC9-201ENST00000303450 A0A1W2PP11 408 aa20.36■□□□□ 0.85
HOXC9-201ENST00000303450 SELLP14151 372 aa20.36■□□□□ 0.85
HOXC9-201ENST00000303450 LCN2P80188 198 aa20.36■□□□□ 0.85
HOXC9-201ENST00000303450 P2RY14Q15391 338 aa20.36■□□□□ 0.85
HOXC9-201ENST00000303450 HES5Q5TA89 166 aa20.36■□□□□ 0.85
HOXC9-201ENST00000303450 FAM166AQ6J272 317 aa20.36■□□□□ 0.85
HOXC9-201ENST00000303450 TMEM185AQ8NFB2 350 aa20.36■□□□□ 0.85
HOXC9-201ENST00000303450 OR51T1Q8NGJ9 327 aa20.36■□□□□ 0.85
HOXC9-201ENST00000303450 CST11Q9H112 138 aa20.36■□□□□ 0.85
HOXC9-201ENST00000303450 METRNQ9UJH8 293 aa20.36■□□□□ 0.85
HOXC9-201ENST00000303450 ST3GAL6Q9Y274 331 aa20.36■□□□□ 0.85
HOXC9-201ENST00000303450 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.36■□□□□ 0.85
HOXC9-201ENST00000303450 IFITM5A6NNB3 132 aa20.35■□□□□ 0.85
HOXC9-201ENST00000303450 CRTAPO75718 401 aaPredicted RBP20.35■□□□□ 0.85
HOXC9-201ENST00000303450 TGFAP01135 160 aa20.35■□□□□ 0.85
HOXC9-201ENST00000303450 MSMBP08118 114 aa20.35■□□□□ 0.85
HOXC9-201ENST00000303450 ZFP36P26651 326 aaKnown RBP20.35■□□□□ 0.85
HOXC9-201ENST00000303450 TGFBR1P36897 503 aa20.35■□□□□ 0.85
HOXC9-201ENST00000303450 CAPZA1P52907 286 aa20.35■□□□□ 0.85
HOXC9-201ENST00000303450 COL10A1Q03692 680 aa20.35■□□□□ 0.85
HOXC9-201ENST00000303450 SCN1BQ07699 218 aa20.35■□□□□ 0.85
HOXC9-201ENST00000303450 PIGYQ3MUY2 71 aa20.35■□□□□ 0.85
HOXC9-201ENST00000303450 ST8SIA4Q92187 359 aa20.35■□□□□ 0.85
HOXC9-201ENST00000303450 SLC25A28Q96A46 364 aa20.35■□□□□ 0.85
HOXC9-201ENST00000303450 MRPS24Q96EL2 167 aaKnown RBP20.35■□□□□ 0.85
HOXC9-201ENST00000303450 NAA50Q9GZZ1 169 aaKnown RBP20.35■□□□□ 0.85
HOXC9-201ENST00000303450 SEBOXQ9HB31 216 aaPredicted RBP20.35■□□□□ 0.85
HOXC9-201ENST00000303450 SLC25A10Q9UBX3 287 aaPredicted RBP20.35■□□□□ 0.85
HOXC9-201ENST00000303450 STEAP1Q9UHE8 339 aa20.35■□□□□ 0.85
HOXC9-201ENST00000303450 NOTOA8MTQ0 251 aa20.34■□□□□ 0.85
HOXC9-201ENST00000303450 BPNT1O95861 308 aa20.34■□□□□ 0.85
HOXC9-201ENST00000303450 ARSBP15848 533 aa20.34■□□□□ 0.85
HOXC9-201ENST00000303450 CLDN12P56749 244 aa20.34■□□□□ 0.85
HOXC9-201ENST00000303450 SLC16A12Q6ZSM3 486 aa20.34■□□□□ 0.85
HOXC9-201ENST00000303450 NR2C2APQ86WQ0 139 aa20.34■□□□□ 0.85
HOXC9-201ENST00000303450 ASCC1Q8N9N2 400 aaKnown RBP20.34■□□□□ 0.85
HOXC9-201ENST00000303450 SMR3AQ99954 134 aa20.34■□□□□ 0.85
HOXC9-201ENST00000303450 BANF2Q9H503 90 aa20.34■□□□□ 0.85
HOXC9-201ENST00000303450 ARHGAP32A7KAX9 2087 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 A8MXK9 166 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 AIPO00170 330 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 CLEC2LP0C7M8 214 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 ZNF44P15621 663 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 MGMTP16455 207 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 ZNF16P17020 682 aaPredicted RBP20.33■□□□□ 0.85
HOXC9-201ENST00000303450 RBM11P57052 281 aaKnown RBP20.33■□□□□ 0.85
HOXC9-201ENST00000303450 VBP1P61758 197 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 NCS1P62166 190 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 IL13RA2Q14627 380 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 NHLRC3Q5JS37 347 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 BIVMQ86UB2 503 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 TMEM104Q8NE00 496 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 FAM46BQ96A09 425 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 OR5V1Q9UGF6 321 aa20.33■□□□□ 0.85
HOXC9-201ENST00000303450 A0A0G2JK05 382 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms