RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SLC2A9Q9NRM0 540 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 KLHL13Q9P2N7 655 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 B3GALT1Q9Y5Z6 326 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 THADAQ6YHU6 1953 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 A0A1B0GWJ7 208 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 A0A1W2PQF6 199 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 AMBPP02760 352 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF728P0DKX0 622 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 EPHA1P21709 976 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 HNRNPA2B1P22626 353 aaKnown RBP9.48□□□□□ -0.89
ZNF558-201ENST00000301475 CPEB2Q7Z5Q1 589 aaKnown RBP9.48□□□□□ -0.89
ZNF558-201ENST00000301475 D2HGDHQ8N465 521 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 OR2C3Q8N628 320 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 SLC38A9Q8NBW4 561 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 OR14L1PQ8NHC6 308 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 ATG101Q9BSB4 218 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 CHST11Q9NPF2 352 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 B3GAT1Q9P2W7 334 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 SHISA8B8ZZ34 492 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 ONECUT2O95948 504 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 FGF7P21781 194 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 SFTPDP35247 375 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 ALDH3B1P43353 468 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 OR1D4P47884 311 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 HLA-DRB3P79483 266 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 C1orf61Q13536 156 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 ABCA11PQ4W5N1 156 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 SLC22A25Q6T423 547 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 PARM1Q6UWI2 310 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 DOK3Q7L591 496 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 YAF2Q8IY57 180 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 SLC35G3Q8N808 338 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 SUMF1Q8NBK3 374 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 OR13H1Q8NG92 308 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 DYRK2Q92630 601 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 LYZL4Q96KX0 146 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 GLRX2Q9NS18 164 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 PLEKHJ1Q9NW61 149 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 CYP8B1Q9UNU6 501 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 COL5A1P20908 1838 aaPredicted RBP9.48□□□□□ -0.89
ZNF558-201ENST00000301475 FAM221AA4D161 298 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 PITX3O75364 302 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 RND2P52198 227 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF266Q14584 549 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 FAM90A2PQ658T7 463 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 Q6ZSR6 202 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 PLPP5Q8NEB5 264 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 PIGTQ969N2 578 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 DDA1Q9BW61 102 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 MRPL13Q9BYD1 178 aaKnown RBP9.48□□□□□ -0.89
ZNF558-201ENST00000301475 CALHM2Q9HA72 323 aa9.48□□□□□ -0.89
ZNF558-201ENST00000301475 NPIPB13A6NJU9 1138 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 NPIPB4C9JG80 1138 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 H3BML4 177 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 PNLIPP16233 465 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 FAHP16930 419 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 ZFP36L1Q07352 338 aaKnown RBP9.47□□□□□ -0.89
ZNF558-201ENST00000301475 HYAL1Q12794 435 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 FOXF1Q12946 379 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 SLC16A14Q7RTX9 510 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 ODF3L1Q8IXM7 274 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 NAXEQ8NCW5 288 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 WWTR1Q9GZV5 400 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 C8orf33Q9H7E9 229 aaPredicted RBP9.47□□□□□ -0.89
ZNF558-201ENST00000301475 SERINC1Q9NRX5 453 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 PITPNC1Q9UKF7 332 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 SLC7A11Q9UPY5 501 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 CFAP54Q96N23 3096 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 IGKV3D-11A0A0A0MRZ8 115 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 KIR2DS5A0A0G2JLQ3 304 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 A0A0G2JNG1 304 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 FAM230AA0A1W2PPH8 454 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF850A8MQ14 1090 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 TMEM150CB9EJG8 249 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 KIR2DS3K7RE56 304 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 DVL1O14640 695 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 PHF1O43189 567 aaPredicted RBP9.47□□□□□ -0.89
ZNF558-201ENST00000301475 CA11O75493 328 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 FCGR2AP12318 317 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 RAB4BP61018 213 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 RPL23AP62750 156 aaKnown RBP9.47□□□□□ -0.89
ZNF558-201ENST00000301475 GABREP78334 506 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 KIR2DS5Q14953 304 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 RSPO4Q2I0M5 234 aaPredicted RBP9.47□□□□□ -0.89
ZNF558-201ENST00000301475 C16orf47Q6ZP98 133 aaPredicted RBP9.47□□□□□ -0.89
ZNF558-201ENST00000301475 TMEM183AQ8IXX5 376 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 TMEM123Q8N131 208 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF283Q8N7M2 679 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 OR2AJ1Q8NGZ0 328 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 SNIP1Q8TAD8 396 aaKnown RBP9.47□□□□□ -0.89
ZNF558-201ENST00000301475 FAAP24Q9BTP7 215 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 GPR87Q9BY21 358 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 CDH20Q9HBT6 801 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 OR14J1Q9UGF5 321 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 VDAC3Q9Y277 283 aa9.47□□□□□ -0.89
ZNF558-201ENST00000301475 A0A1B0GU03 582 aa9.46□□□□□ -0.89
ZNF558-201ENST00000301475 CYTIPO60759 359 aa9.46□□□□□ -0.89
ZNF558-201ENST00000301475 HOXB2P14652 356 aa9.46□□□□□ -0.89
ZNF558-201ENST00000301475 NTSR1P30989 418 aa9.46□□□□□ -0.89
ZNF558-201ENST00000301475 CD200P41217 278 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms