RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 TTRP02766 147 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 MELTFP08582 738 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 DANCRP0C864 163 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 CD200P41217 278 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 TMEM50BP56557 158 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 FAM3AP98173 230 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 NCR3LG1Q68D85 454 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 DNM1P46Q6ZS02 220 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 PCED1AQ9H1Q7 454 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 IGKV1D-43A0A0B4J1Z2 117 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 A6NCN8 305 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 FTCDNL1E5RQL4 147 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 SPRY1O43609 319 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-201ENST00000297423 MMP16P51512 607 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 DMWDQ09019 674 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 LINC00114Q6XXX2 140 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 DDA1Q9BW61 102 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 AURKAIP1Q9NWT8 199 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-201ENST00000297423 HDGFL3Q9Y3E1 203 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 A6NNC1 897 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 BCAT2O15382 392 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-201ENST00000297423 TBPP20226 339 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 SPCS3P61009 180 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 C1QL2Q7Z5L3 287 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 BAHD1Q8TBE0 780 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-201ENST00000297423 RTN4RQ9BZR6 473 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 GSTP1P09211 210 aaKnown RBP13.05□□□□□ -0.32
SPIDR-201ENST00000297423 H3F3AP84243 136 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 SLC35G3Q8N808 338 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 LFNGQ8NES3 379 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 SCGB1C1Q8TD33 95 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-201ENST00000297423 TAAR9Q96RI9 348 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 ZNF160Q9HCG1 818 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 COPS7AQ9UBW8 275 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 DFFBO76075 338 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 NKX2-1P43699 371 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-201ENST00000297423 ELOBQ15370 118 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 STRAPQ9Y3F4 350 aaKnown RBP13.05□□□□□ -0.32
SPIDR-201ENST00000297423 FIGNL2A6NMB9 653 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 EREGO14944 169 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 IFNA5P01569 189 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 CSRP1P21291 193 aaKnown RBP13.05□□□□□ -0.32
SPIDR-201ENST00000297423 MTCP1P56278 107 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 PCK2Q16822 640 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 FAM166AQ6J272 317 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 MYPOPQ86VE0 399 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-201ENST00000297423 HIST3H2BBQ8N257 126 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 MAFAQ8NHW3 353 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-201ENST00000297423 MUCL1Q96DR8 90 aa13.05□□□□□ -0.32
SPIDR-201ENST00000297423 CHD3Q12873 2000 aaKnown RBP13.04□□□□□ -0.32
SPIDR-201ENST00000297423 A0A0A6YYD4 124 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 DHRS7CA6NNS2 312 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 TGOLN2O43493 480 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 FUT3P21217 361 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 HLA-DRB3P79483 266 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 GUCD1Q96NT3 240 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 G6PC2Q9NQR9 355 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 GPR173Q9NS66 373 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 KLRF1Q9NZS2 232 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 STARD10Q9Y365 291 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 IGKV1D-8A0A087WSZ0 117 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 MSTNO14793 375 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 SGCBQ16585 318 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 C1orf100Q5SVJ3 147 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 ELOVL1Q9BW60 279 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 MSL2Q9HCI7 577 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 DCAF16Q9NXF7 216 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 TRBV6-7A0A0A0MS04 114 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 A0A1W2PNR3 127 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 H3BMH7 237 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 SEC11BP0C7V7 166 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 DUSP1P28562 367 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 P2RY1P47900 373 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 SPEM2Q0P670 501 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 TIPARPQ7Z3E1 657 aaKnown RBP13.04□□□□□ -0.32
SPIDR-201ENST00000297423 SYT3Q9BQG1 590 aa13.04□□□□□ -0.32
SPIDR-201ENST00000297423 PPP5D1E7EU14 171 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 RPS16P62249 146 aaKnown RBP13.03□□□□□ -0.32
SPIDR-201ENST00000297423 ZNF266Q14584 549 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 ISXQ2M1V0 245 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 UEVLDQ8IX04 471 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 LRRC75AQ8NAA5 344 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 C8orf44Q96CB5 159 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 GPX7Q96SL4 187 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-201ENST00000297423 EGLN1Q9GZT9 426 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 PATZ1Q9HBE1 687 aaKnown RBP13.03□□□□□ -0.32
SPIDR-201ENST00000297423 DBX1A6NMT0 343 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 CLDN34H7C241 214 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 EDN3P14138 238 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 KISS1Q15726 138 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 TMEM176BQ3YBM2 270 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-201ENST00000297423 IL22RA2Q969J5 263 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 PLK3Q9H4B4 646 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 RIF1Q5UIP0 2472 aaKnown RBP13.03□□□□□ -0.32
SPIDR-201ENST00000297423 IGLV1-36A0A0B4J1U3 117 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 SRSF4Q08170 494 aaKnown RBP13.03□□□□□ -0.32
SPIDR-201ENST00000297423 CLN3Q13286 438 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 TEX30Q5JUR7 227 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 ZNF574Q6ZN55 896 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms