RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ZNF528Q3MIS6 628 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 PXDC1Q5TGL8 231 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 NSUN5P2Q63ZY6 315 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 ASCL4Q6XD76 172 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 COLCA1Q6ZS62 124 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 C17orf78Q8N4C9 275 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 POC1AQ8NBT0 407 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 MDS2Q8NDY4 140 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 OR1S2Q8NGQ3 325 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 APH1AQ96BI3 265 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 NMES1Q9C002 83 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 ZNF442Q9H7R0 627 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 SLC7A11Q9UPY5 501 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 DMXL2Q8TDJ6 3036 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 IL18BPO95998 194 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 CELA3BP08861 270 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 IL32P24001 234 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 WNT5AP41221 380 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 RBM11P57052 281 aaKnown RBP10.13□□□□□ -0.79
RHO-201ENST00000296271 SRSF3P84103 164 aaKnown RBP10.13□□□□□ -0.79
RHO-201ENST00000296271 ZNF100Q8IYN0 542 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 OR5L1Q8NGL2 311 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 MARVELD3Q96A59 401 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 PIK3IP1Q96FE7 263 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 BSCL2Q96G97 398 aaPredicted RBP10.13□□□□□ -0.79
RHO-201ENST00000296271 REPIN1Q9BWE0 567 aaKnown RBP10.13□□□□□ -0.79
RHO-201ENST00000296271 RAB18Q9NP72 206 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 TMEM9BQ9NQ34 198 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 MTCH1Q9NZJ7 389 aa10.13□□□□□ -0.79
RHO-201ENST00000296271 C14orf166Q9Y224 244 aaKnown RBP10.13□□□□□ -0.79
RHO-201ENST00000296271 DIDO1Q9BTC0 2240 aaKnown RBP10.12□□□□□ -0.79
RHO-201ENST00000296271 TUBAL3A6NHL2 446 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 SCGB1D2O95969 90 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 IFNA2P01563 188 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 OR5AC1P0C628 307 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 SELEP16581 610 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 IL15RAQ13261 267 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 SNTB1Q13884 538 aaKnown RBP10.12□□□□□ -0.79
RHO-201ENST00000296271 IAH1Q2TAA2 248 aaPredicted RBP10.12□□□□□ -0.79
RHO-201ENST00000296271 ASB13Q8WXK3 278 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 SPSB4Q96A44 273 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 DHRS9Q9BPW9 319 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 SMIM3Q9BZL3 60 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 LDAHQ9H6V9 325 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 TRAV39A0A0B4J263 110 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 ZNF732B4DXR9 585 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 NME2P1O60361 137 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 HOXD4P09016 255 aaPredicted RBP10.12□□□□□ -0.79
RHO-201ENST00000296271 NME2P22392 152 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 TRIP6Q15654 476 aaKnown RBP10.12□□□□□ -0.79
RHO-201ENST00000296271 FAM189A2Q15884 450 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 GGNBP1Q5YKI7 109 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 LYZL2Q7Z4W2 148 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 DEFB124Q8NES8 71 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 FAM117AQ9C073 453 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 PRDM14Q9GZV8 571 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 BCO1Q9HAY6 547 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 ASF1BQ9NVP2 202 aa10.12□□□□□ -0.79
RHO-201ENST00000296271 XRCC2O43543 280 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 DIRAS3O95661 229 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 ZP3P21754 424 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 ERVS71-1P61550 626 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 EIF3IQ13347 325 aaKnown RBP10.11□□□□□ -0.79
RHO-201ENST00000296271 MRPL21Q7Z2W9 205 aaKnown RBP10.11□□□□□ -0.79
RHO-201ENST00000296271 OR5T2Q8NGG2 359 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 LHFPL5Q8TAF8 219 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 POM121L2Q96KW2 1035 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 C2orf50Q96LR7 162 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 PARD6AQ9NPB6 346 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 PARPBPQ9NWS1 579 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 ABI3Q9P2A4 366 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 HSF4Q9ULV5 492 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 PCDHB10Q9UN67 800 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 SPEF1Q9Y4P9 236 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 LSM5Q9Y4Y9 91 aaKnown RBP10.11□□□□□ -0.79
RHO-201ENST00000296271 TRBV6-7A0A0A0MS04 114 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 PQLC2LA1A4F0 135 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 CRYM-AS1A6NIL9 109 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 PDCD6O75340 191 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 APOC3P02656 99 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 SCTP09683 121 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 ZNF728P0DKX0 622 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 AADACP22760 399 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 ARG2P78540 354 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 SLC10A1Q14973 349 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 OR2T2Q6IF00 324 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 ZNF585AQ6P3V2 769 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 PARP12Q9H0J9 701 aaKnown RBP10.11□□□□□ -0.79
RHO-201ENST00000296271 TMEM231Q9H6L2 316 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 TAS2R3Q9NYW6 316 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 LHX6Q9UPM6 363 aa10.11□□□□□ -0.79
RHO-201ENST00000296271 SLC33A1O00400 549 aaPredicted RBP10.1□□□□□ -0.79
RHO-201ENST00000296271 BET1O15155 118 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 RHBDL1O75783 438 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 ZNF806P0C7X5 589 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 ID4P47928 161 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 CCL11P51671 97 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 ALKBH6Q3KRA9 238 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 PAN3Q58A45 887 aaKnown RBP10.1□□□□□ -0.79
RHO-201ENST00000296271 RPL7L1Q6DKI1 246 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms