RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 VAMP1P23763 118 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 CPT2P23786 658 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 APLNRP35414 380 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 TDGF1P3P51864 188 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 ATP1B3P54709 279 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 FOXG1P55316 489 aaPredicted RBP14.49□□□□□ -0.09
CPSF4-201ENST00000292476 C17orf78Q8N4C9 275 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 INO80EQ8NBZ0 244 aaPredicted RBP14.49□□□□□ -0.09
CPSF4-201ENST00000292476 MARCH1Q8TCQ1 289 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 ARHGAP5-AS1Q96IT6 56 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 BANF2Q9H503 90 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 OPA3Q9H6K4 179 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 OBP2BQ9NPH6 170 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 CCSO14618 274 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 SFT2D2O95562 160 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 AKR1C4P17516 323 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 AMY2BP19961 511 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 COX5AP20674 150 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 IGHV1-2P23083 117 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 PSMB6P28072 239 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 MRPL49Q13405 166 aaKnown RBP14.49□□□□□ -0.09
CPSF4-201ENST00000292476 ARFRP1Q13795 201 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 CRIP3Q6Q6R5 217 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 GFRALQ6UXV0 394 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 RNF144BQ7Z419 303 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 CPEB3Q8NE35 698 aaKnown RBP14.49□□□□□ -0.09
CPSF4-201ENST00000292476 SEMA6DQ8NFY4 1073 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 OR51T1Q8NGJ9 327 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 STOML3Q8TAV4 291 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 APOBEC3DQ96AK3 386 aaPredicted RBP14.49□□□□□ -0.09
CPSF4-201ENST00000292476 SPSB1Q96BD6 273 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 SGK3Q96BR1 496 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 REEP6Q96HR9 211 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 LINC00052Q96N35 136 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 SFXN3Q9BWM7 321 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 SHARPINQ9H0F6 387 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 NBASA2RRP1 2371 aa14.48□□□□□ -0.09
CPSF4-201ENST00000292476 LOC100509620A0A075B734 347 aa14.48□□□□□ -0.09
CPSF4-201ENST00000292476 J3QW42 95 aa14.48□□□□□ -0.09
CPSF4-201ENST00000292476 ZNHIT1O43257 154 aa14.48□□□□□ -0.09
CPSF4-201ENST00000292476 RAD51DO75771 328 aa14.48□□□□□ -0.09
CPSF4-201ENST00000292476 TNFSF13O75888 250 aa14.48□□□□□ -0.09
CPSF4-201ENST00000292476 TAGLNQ01995 201 aaKnown RBP14.48□□□□□ -0.09
CPSF4-201ENST00000292476 NAAAQ02083 359 aa14.48□□□□□ -0.09
CPSF4-201ENST00000292476 MALLQ13021 153 aa14.48□□□□□ -0.09
CPSF4-201ENST00000292476 COLCA1Q6ZS62 124 aa14.48□□□□□ -0.09
CPSF4-201ENST00000292476 SNRNP40Q96DI7 357 aaKnown RBP14.48□□□□□ -0.09
CPSF4-201ENST00000292476 STARD4Q96DR4 205 aa14.48□□□□□ -0.09
CPSF4-201ENST00000292476 ARPC5LQ9BPX5 153 aa14.48□□□□□ -0.09
CPSF4-201ENST00000292476 CHMP1AQ9HD42 196 aaPredicted RBP14.48□□□□□ -0.09
CPSF4-201ENST00000292476 OSGIN2Q9Y236 505 aa14.48□□□□□ -0.09
CPSF4-201ENST00000292476 E9PLN8 166 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 LYL1P12980 280 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 ANOS1P23352 680 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 GABRA6Q16445 453 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 SNAI3Q3KNW1 292 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 HIKESHIQ53FT3 197 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 VWA1Q6PCB0 445 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 CASTOR1Q8WTX7 329 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 SEC22AQ96IW7 307 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 TECTBQ96PL2 329 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 S100A13Q99584 98 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 PECRQ9BY49 303 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 C5orf66Q9H5L9 145 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 ASF1BQ9NVP2 202 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 FAM215AQ9Y5M1 114 aa14.47□□□□□ -0.09
CPSF4-201ENST00000292476 MED12LQ86YW9 2145 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 TEX13DA0A0J9YY54 714 aaPredicted RBP14.46□□□□□ -0.09
CPSF4-201ENST00000292476 LOC105371267A0A1B0GV96 52 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 C5orf49A4QMS7 147 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 POM121CA8CG34 1229 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 F8VVB4 439 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 F8VWA3 439 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 SCO1O75880 301 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 CGAP01215 116 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 CEACAM8P31997 349 aaPredicted RBP14.46□□□□□ -0.09
CPSF4-201ENST00000292476 LUMP51884 338 aaPredicted RBP14.46□□□□□ -0.09
CPSF4-201ENST00000292476 UBE2V2Q15819 145 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 TBC1D28Q2M2D7 210 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 SEM1Q6ZVN7 128 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 KCTD9Q7L273 389 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 STPG2Q8N412 459 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 OR5L1Q8NGL2 311 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 EMG1Q92979 244 aaKnown RBP14.46□□□□□ -0.09
CPSF4-201ENST00000292476 SPSB4Q96A44 273 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 TMEM230Q96A57 120 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 POM121L2Q96KW2 1035 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 MBD2Q9UBB5 411 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 PIGLQ9Y2B2 252 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 SHANK1Q9Y566 2161 aa14.46□□□□□ -0.09
CPSF4-201ENST00000292476 ARHGAP21Q5T5U3 1957 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 C5orf51A6NDU8 294 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 FAM25EA8MYX2 175 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 BLVRBP30043 206 aaPredicted RBP14.46□□□□□ -0.1
CPSF4-201ENST00000292476 OPRM1P35372 400 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 SERPINF1P36955 418 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 FOXF2Q12947 444 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 PAN3Q58A45 887 aaKnown RBP14.46□□□□□ -0.1
CPSF4-201ENST00000292476 UNQ6126/PRO20091Q6UXV3 157 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 RTN4RL2Q86UN3 420 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms