RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 CLEC1BQ9P126 229 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 LPAR3Q9UBY5 353 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 RNF150Q9ULK6 438 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 PLXNA3P51805 1871 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 NOTCH4Q99466 2003 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 LOC102723971A0A1B0GUV8 181 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 OR5H15A6NDH6 313 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 OR5H1A6NKK0 313 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 B4GALT1P15291 398 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 BMP5P22003 454 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 GALR1P47211 349 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 AMTP48728 403 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 GAS1P54826 345 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 HLA-DRB3P79483 266 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 HLA-CQ95604 372 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 CTHRC1Q96CG8 243 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 LYRM2Q9NU23 88 aaPredicted RBP11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 FREM3P0C091 2139 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 FAM24AA6NFZ4 105 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 EIF1P41567 113 aaKnown RBP11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 PRSS54Q6PEW0 395 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 OR5C1Q8NGR4 320 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 OR51F2Q8NH61 342 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 OR10J5Q8NHC4 309 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 ROBO4Q8WZ75 1007 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 TLNRD1Q9H1K6 362 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 OR51M1Q9H341 326 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 BET1LQ9NYM9 111 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 CXCL13O43927 109 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 GLULP15104 373 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 SSBP1Q04837 148 aaKnown RBP11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 VASH2Q86V25 355 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 MAML2Q8IZL2 1156 aaPredicted RBP11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 SLC26A10Q8NG04 563 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 FAM122AQ96E09 287 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 RASL12Q9NYN1 266 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 MYOTQ9UBF9 498 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 NAT8BQ9UHF3 227 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 MRPS18BQ9Y676 258 aaKnown RBP11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 IGKV1D-42A0A075B6H8 117 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 TNFSF11O14788 317 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 EIF3GO75821 320 aaKnown RBP eCLIP11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 DUS4LO95620 317 aaKnown RBP11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 CRHP06850 196 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 IRF2P14316 349 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 COX5AP20674 150 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 TMEM241Q24JQ0 296 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 DPPA3Q6W0C5 159 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 STRADBQ9C0K7 418 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 RAB18Q9NP72 206 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 LANCL2Q9NS86 450 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 A0A0G2JK05 382 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 KIR2DS1A0A191URI9 304 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 OR7C2O60412 319 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 UPK3AO75631 287 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 RPS4Y1P22090 263 aaKnown RBP11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 ENPP1P22413 925 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 KIR2DS4P43632 304 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 KIR2DS1Q14954 304 aa11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 RBMXL3Q8N7X1 1067 aaKnown RBP11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 ZNF275Q9NSD4 429 aaPredicted RBP11.11□□□□□ -0.63
SLC6A1-201ENST00000287766 CTDSPLO15194 276 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 CER1O95813 267 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 GSTP1P09211 210 aaKnown RBP11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 FGF8P55075 233 aaPredicted RBP11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 CEBPEQ15744 281 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 TFAP2EQ6VUC0 442 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 OVCH2Q7RTZ1 564 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 ZDHHC22Q8N966 263 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 ATP5SQ99766 215 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 PSENENQ9NZ42 101 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 FAM166BA8MTA8 275 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 SOCS1O15524 211 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 HAAOP46952 286 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 ERVFC1-1P60608 527 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 ZNF385CQ66K41 422 aaPredicted RBP11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 LAMTOR1Q6IAA8 161 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 ZNF600Q6ZNG1 722 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 H2BFWTQ7Z2G1 175 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 MRGPRX4Q96LA9 322 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 ZNF426Q9BUY5 554 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 TRPM7Q96QT4 1865 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 BGLAPP02818 100 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 ASAH2BP0C7U1 165 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 CCKARP32238 428 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 DHODHQ02127 395 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 LINC01590Q5TEZ4 76 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 OR5AS1Q8N127 324 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 DTWD2Q8NBA8 298 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 OXGR1Q96P68 337 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 NRIP2Q9BQI9 281 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 FKBP11Q9NYL4 201 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 A0A1W2PR80 420 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 RBFOX3A6NFN3 312 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 NXPH2O95156 264 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 PCBD1P61457 104 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 UBE2V2Q15819 145 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 ZNF660Q6AZW8 331 aaPredicted RBP11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 TDHQ8IZJ6 230 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 TCTEX1D1Q8N7M0 179 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms