RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 CD300LDQ6UXZ3 194 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PGAP1Q75T13 922 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ZNF808Q8N4W9 903 aaPredicted RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 MORN4Q8NDC4 146 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ADPRHL1Q8NDY3 354 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 NFAM1Q8NET5 270 aaPredicted RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 PXT1Q8NFP0 134 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 OR1M1Q8NGA1 313 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 OR4S1Q8NGB4 309 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 MITD1Q8WV92 249 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 SECTM1Q8WVN6 248 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 RAB1CQ92928 201 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 WFDC6Q9BQY6 131 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 SULT4A1Q9BR01 284 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 SLC19A3Q9BZV2 496 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PKIBQ9C010 78 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 TXNIPQ9H3M7 391 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 GPR84Q9NQS5 396 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ZFP57Q9NU63 452 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 B3GNT2Q9NY97 397 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 OR14J1Q9UGF5 321 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 NXT1Q9UKK6 140 aaKnown RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 DNAJC13O75165 2243 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ACACBO00763 2458 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 TRAV1-2A0A0B4J238 106 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 OR5H14A6NHG9 310 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 CD300LBA8K4G0 201 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 C1orf196B1AJZ1 125 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 KRBOX1C9JBD0 128 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 EIF1BO60739 113 aaKnown RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 NXPH3O95157 252 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 CCL2P13500 99 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 RPA2P15927 270 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 PSMB6P28072 239 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 OTX1P32242 354 aaPredicted RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 RPS27AP62979 156 aaKnown RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 UBA52P62987 128 aaKnown RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 FAM27E3Q08E93 113 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 BAMBIQ13145 260 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 IKZF1Q13422 519 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 EXOSC2Q13868 293 aaKnown RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 FZD2Q14332 565 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 USF2Q15853 346 aaPredicted RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 PNLIPRP3Q17RR3 467 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 HIKESHIQ53FT3 197 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ZNF684Q5T5D7 378 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 LAIR1Q6GTX8 287 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ZNF425Q6IV72 752 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 DND1Q8IYX4 353 aaKnown RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 HSD17B11Q8NBQ5 300 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 SMIM4Q8WVI0 70 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 PSMF1Q92530 271 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 PIGMQ9H3S5 423 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ADGRL4Q9HBW9 690 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 BIN3Q9NQY0 253 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 NDRG3Q9UGV2 375 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 EXOGQ9Y2C4 368 aaKnown RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 PCYT1BQ9Y5K3 369 aaPredicted RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 CKAP5Q14008 2032 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 MYO9AB2RTY4 2548 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 MCRIP1C9JLW8 97 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 LMO7DNF2Z398 122 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 PHF1O43189 567 aaPredicted RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 XRCC3O43542 346 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 NEURL1O76050 574 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 MPZL1O95297 269 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 GIPP09681 153 aaPredicted RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 OR4E1P0C645 316 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ZNF728P0DKX0 622 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ABOP16442 354 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ALOX5APP20292 161 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 CFPP27918 469 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 LAP3P28838 519 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 HRH1P35367 487 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 OPRM1P35372 400 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 CLDN18P56856 261 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 TFF2Q03403 129 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ZNF117Q03924 483 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 FMODQ06828 376 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 CLINT1Q14677 625 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ZNF169Q14929 603 aaPredicted RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 LTC4SQ16873 150 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 THEM4Q5T1C6 240 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 TIGD3Q6B0B8 471 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 FAM199XQ6PEV8 388 aaPredicted RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 C17orf107Q6ZR85 190 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 LANCL3Q6ZV70 420 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 CPEB2Q7Z5Q1 589 aaKnown RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 SVBPQ8N300 66 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 TMEM217Q8N7C4 229 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 SUMF1Q8NBK3 374 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 OR9K2Q8NGE7 335 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 OR4C16Q8NGL9 310 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 MRGPRFQ96AM1 343 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 S100PBPQ96BU1 408 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 UPRTQ96BW1 309 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 WBP1Q96G27 269 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 SPIN2AQ99865 258 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 SPIN2BQ9BPZ2 258 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ZNF286AQ9HBT8 521 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms