RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 RDH12Q96NR8 316 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 SSX3Q99909 188 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 RBFOX1Q9NWB1 397 aaKnown RBP13.08□□□□□ -0.32
USE1-201ENST00000263897 IL36RNQ9UBH0 155 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 WNK1Q9H4A3 2382 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 TSPAN9O75954 239 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 ZFPL1O95159 310 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 OCM2P0CE71 109 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 OCMP0CE72 109 aaPredicted RBP13.07□□□□□ -0.32
USE1-201ENST00000263897 ZNF728P0DKX0 622 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 DUSP1P28562 367 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 MRPL28Q13084 256 aaKnown RBP13.07□□□□□ -0.32
USE1-201ENST00000263897 ZNF146Q15072 292 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 AANATQ16613 207 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 DHRS7BQ6IAN0 325 aaPredicted RBP13.07□□□□□ -0.32
USE1-201ENST00000263897 RNF144BQ7Z419 303 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 ZNF555Q8NEP9 628 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 OR13C9Q8NGT0 318 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 OR5AK2Q8NH90 309 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 ZCCHC4Q9H5U6 513 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 C16orf95Q9H693 158 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 HMG20AQ9NP66 347 aa13.07□□□□□ -0.32
USE1-201ENST00000263897 SMPD3Q9NY59 655 aaPredicted RBP13.07□□□□□ -0.32
USE1-201ENST00000263897 KIAA2026Q5HYC2 2103 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 IGKV1-12A0A0C4DH73 117 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 FAM90A8PA6NJQ4 464 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 TMEM212A6NML5 194 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 H3BUX3 64 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 PSPNO60542 156 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 WBP4O75554 376 aaKnown RBP13.06□□□□□ -0.32
USE1-201ENST00000263897 CLPXO76031 633 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 ALX3O95076 343 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 IGKV1D-12P01611 117 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 RBP4P02753 201 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 LIMS3P0CW19 117 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 LIMS4P0CW20 117 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 CALCBP10092 127 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 PRKACAP17612 351 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 COX7A1P24310 79 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 PEX2P28328 305 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 BMXP51813 675 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 GBX2P52951 348 aaPredicted RBP13.06□□□□□ -0.32
USE1-201ENST00000263897 LGALS4P56470 323 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 PROK1P58294 105 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 KRTAP10-3P60369 221 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 SMN1Q16637 294 aaKnown RBP13.06□□□□□ -0.32
USE1-201ENST00000263897 ZSCAN26Q16670 478 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 SPIN3Q5JUX0 258 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 CRIP3Q6Q6R5 217 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 ZNF782Q6ZMW2 699 aaPredicted RBP13.06□□□□□ -0.32
USE1-201ENST00000263897 SERPINA12Q8IW75 414 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 PARP16Q8N5Y8 322 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 OR5D14Q8NGL3 314 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 STMN2Q93045 179 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 RFT1Q96AA3 541 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 SPACA5Q96QH8 159 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 CITED1Q99966 193 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 JAM3Q9BX67 310 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 NEK6Q9HC98 313 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 FGF20Q9NP95 211 aaPredicted RBP13.06□□□□□ -0.32
USE1-201ENST00000263897 GLS2Q9UI32 602 aa13.06□□□□□ -0.32
USE1-201ENST00000263897 hADV38S2A0JD32 116 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 MEX3AA1L020 520 aaKnown RBP13.05□□□□□ -0.32
USE1-201ENST00000263897 SH2D1BO14796 132 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 KDM4BO94953 1096 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 CCDC159P0C7I6 412 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 GABRR1P24046 479 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 GRK1Q15835 563 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 LRRC75BQ2VPJ9 315 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 SAXO1Q8IYX7 474 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 OR4S1Q8NGB4 309 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 HAVCR2Q8TDQ0 301 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 PDCD1LG2Q9BQ51 273 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 CHST6Q9GZX3 395 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 COMMD4Q9H0A8 199 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 PPA2Q9H2U2 334 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 RHOFQ9HBH0 211 aa13.05□□□□□ -0.32
USE1-201ENST00000263897 MGST3O14880 152 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 IGHV1-8P0DP01 117 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 LMO1P25800 156 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 PAX6P26367 422 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 DCKP27707 260 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 GTF2A1P52655 376 aaPredicted RBP13.04□□□□□ -0.32
USE1-201ENST00000263897 SNU13P55769 128 aaKnown RBP13.04□□□□□ -0.32
USE1-201ENST00000263897 EDDM3AQ14507 147 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 SLC35E4Q6ICL7 350 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 BRICD5Q6PL45 260 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 TREML4Q6UXN2 200 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 TCF23Q7RTU1 214 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 LHFPL4Q7Z7J7 247 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 TPRX1Q8N7U7 411 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 OR11H6Q8NGC7 330 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 OR5D18Q8NGL1 313 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 OR13D1Q8NGV5 346 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 PPP1R35Q8TAP8 253 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 PIFOQ8TCI5 191 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 ZNF714Q96N38 554 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 DHDHQ9UQ10 334 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 GSTK1Q9Y2Q3 226 aa13.04□□□□□ -0.32
USE1-201ENST00000263897 LINC00312Q9Y6C7 94 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms