RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ZNF32P17041 273 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 SLC25A1P53007 311 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 OR8B12Q8NGG6 310 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 OR1L6Q8NGR2 347 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 OR2V1Q8NHB1 315 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 OR2T6Q8NHC8 308 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 VN1R17PQ8TDU5 208 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 CHST1O43916 411 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 CXCL2P19875 107 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 DMKNQ6E0U4 476 aaPredicted RBP10.7□□□□□ -0.7
SMG6-201ENST00000263073 BCL2L2Q92843 193 aaPredicted RBP10.7□□□□□ -0.7
SMG6-201ENST00000263073 DHRS3O75911 302 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 IL10RAQ13651 578 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 DCAF12L2Q5VW00 463 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 DHRS11Q6UWP2 260 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 NHLRC2Q8NBF2 726 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 SSMEM1Q8WWF3 244 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 OPN4Q9UHM6 478 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 IGHV5-51A0A0C4DH38 117 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 TMEM30CPA0ZSE6 113 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 EIF3GO75821 320 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMG6-201ENST00000263073 S100A4P26447 101 aaKnown RBP10.7□□□□□ -0.7
SMG6-201ENST00000263073 MGAT2Q10469 447 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 DEFB109BQ30KR1 87 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 MESTQ5EB52 335 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 BHLHA9Q7RTU4 235 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 KCNE4Q8WWG9 221 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 PP6455Q8WZ26 134 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 RNF2Q99496 336 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 FBLL1A6NHQ2 334 aaKnown RBP10.69□□□□□ -0.7
SMG6-201ENST00000263073 C3orf80F5H4A9 247 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 SULT1A2P50226 295 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 FZD5Q13467 585 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 Q56UQ5 140 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 RNF165Q6ZSG1 346 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 TCTEX1D1Q8N7M0 179 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 HDHD3Q9BSH5 251 aaPredicted RBP10.69□□□□□ -0.7
SMG6-201ENST00000263073 ONECUT1Q9UBC0 465 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 CDK5RAP2Q96SN8 1893 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 MUC15Q8N387 334 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 GPA33Q99795 319 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 H3BQ15 152 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 CRISP2P16562 243 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 FNDC7Q5VTL7 733 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 LYZL2Q7Z4W2 148 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 SPACA9Q96E40 222 aaPredicted RBP10.69□□□□□ -0.7
SMG6-201ENST00000263073 BET1LQ9NYM9 111 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 FLRT3Q9NZU0 649 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 FIGNL2A6NMB9 653 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 NKX2-2O95096 273 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 CRHP06850 196 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 HMGA2P52926 109 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 KLF9Q13886 244 aaPredicted RBP10.69□□□□□ -0.7
SMG6-201ENST00000263073 HLA-BQ31612 363 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 BSXQ3C1V8 233 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 PTP4A1Q93096 173 aa10.69□□□□□ -0.7
SMG6-201ENST00000263073 PLPP3O14495 311 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 NAT2P11245 290 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 GALNSP34059 522 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 PPOXP50336 477 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 SMIM21Q3B7S5 101 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 TMEM97Q5BJF2 176 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 PABPC1L2AQ5JQF8 200 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 RGS7BPQ6MZT1 257 aaPredicted RBP10.68□□□□□ -0.7
SMG6-201ENST00000263073 TGIF2LYQ8IUE0 185 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 ZNF426Q9BUY5 554 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 TECRQ9NZ01 308 aaKnown RBP10.68□□□□□ -0.7
SMG6-201ENST00000263073 LOXL2Q9Y4K0 774 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 ETV3LQ6ZN32 361 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 OR1B1Q8NGR6 318 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 SLC17A5Q9NRA2 495 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 TAAR3PQ9P1P4 343 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 VSIG4Q9Y279 399 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 TRGV10A0A0A0MS01 117 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 FAM74A7A6NL05 159 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 FKBP2P26885 142 aaKnown RBP10.68□□□□□ -0.7
SMG6-201ENST00000263073 FAM74A3Q4VXF1 159 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 TMEM91Q6ZNR0 172 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 ZAR1Q86SH2 424 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 OR2T10Q8NGZ9 312 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 ZPLD1Q8TCW7 415 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 SEC11CQ9BY50 192 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 GSX1Q9H4S2 264 aaPredicted RBP10.68□□□□□ -0.7
SMG6-201ENST00000263073 HDGFL3Q9Y3E1 203 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 C11orf94C9JXX5 98 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 ERVH48-1M5A8F1 160 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 RAB29O14966 203 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 CIDEAO60543 219 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 ZNF253O75346 499 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 RPL7P18124 248 aaKnown RBP10.68□□□□□ -0.7
SMG6-201ENST00000263073 OR3A1P47881 315 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 ZNF83P51522 516 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 SLC35B1P78383 322 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 FAM53BQ14153 422 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 ADIPOR1Q96A54 375 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 P4HTMQ9NXG6 502 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 PRSS50Q9UI38 385 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 SIRT4Q9Y6E7 314 aaPredicted RBP10.68□□□□□ -0.7
SMG6-201ENST00000263073 MARF1Q9Y4F3 1742 aaKnown RBP10.68□□□□□ -0.7
SMG6-201ENST00000263073 IL2RAP01589 272 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms