RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 BRWD1Q9NSI6 2320 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 C2orf16Q68DN1 1984 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 C2orf72A6NCS6 295 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 CA11O75493 328 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 CRYABP02511 175 aaKnown RBP13.08□□□□□ -0.32
XRCC1-201ENST00000262887 ZNF728P0DKX0 622 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 ZNF43P17038 809 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 SFTPDP35247 375 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 CD200P41217 278 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 RPP30P78346 268 aaKnown RBP13.08□□□□□ -0.32
XRCC1-201ENST00000262887 HNF4GQ14541 408 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 JOSD1Q15040 202 aaPredicted RBP13.08□□□□□ -0.32
XRCC1-201ENST00000262887 OR14L1PQ8NHC6 308 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 BOD1Q96IK1 185 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 C18orf12Q96KH6 178 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 LIME1Q9H400 295 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 IL23AQ9NPF7 189 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 B4DEV8 164 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 H3BML4 177 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 RER1O15258 196 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 ZNF205O95201 554 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 CLRN1P58418 232 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 HLA-DRB3P79483 266 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 LIAT1Q6ZQX7 453 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 C5orf24Q7Z6I8 188 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 GPR137CQ8N3F9 429 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 LRTM2Q8N967 370 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 SLC38A9Q8NBW4 561 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.08□□□□□ -0.32
XRCC1-201ENST00000262887 LIN37Q96GY3 246 aaPredicted RBP13.08□□□□□ -0.32
XRCC1-201ENST00000262887 SNX22Q96L94 193 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 DDA1Q9BW61 102 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 VN1R1Q9GZP7 353 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 FBRSQ9HAH7 460 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 SERINC1Q9NRX5 453 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 COPS7AQ9UBW8 275 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 PITPNC1Q9UKF7 332 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 VDAC3Q9Y277 283 aa13.08□□□□□ -0.32
XRCC1-201ENST00000262887 CCDC187A0A096LP49 1063 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 ZNF850A8MQ14 1090 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 DVL1O14640 695 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 PGA4P0DJD7 388 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 PGA5P0DJD9 388 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 CCL1P22362 96 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 CSNK1A1P48729 337 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 FXYD4P59646 89 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 PHLDA2Q53GA4 152 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 FBXL14Q8N1E6 418 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 RCC1LQ96I51 464 aaKnown RBP13.07□□□□□ -0.32
XRCC1-201ENST00000262887 TM2D1Q9BX74 207 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 HSF4Q9ULV5 492 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 FCGR2AP12318 317 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 ALDH3B1P43353 468 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 ZNF664Q8N3J9 261 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 OR5L1Q8NGL2 311 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 BADQ92934 168 aa13.07□□□□□ -0.32
XRCC1-201ENST00000262887 NXT1Q9UKK6 140 aaKnown RBP13.07□□□□□ -0.32
XRCC1-201ENST00000262887 TRIOBPQ9H2D6 2365 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 IGKV3D-11A0A0A0MRZ8 115 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 FAM24AA6NFZ4 105 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 ATXN7O15265 892 aaPredicted RBP13.06□□□□□ -0.32
XRCC1-201ENST00000262887 GZMBP10144 247 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 MFAP5Q13361 173 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 CRIP3Q6Q6R5 217 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 LGI3Q8N145 548 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 OR2C3Q8N628 320 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 DDIT4LQ96D03 193 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 MRGPRX1Q96LB2 322 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 KLHL13Q9P2N7 655 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 B3GALT1Q9Y5Z6 326 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 DLEU1O43261 78 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 HSPA12AO43301 675 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 SOX15O60248 233 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 RPL23AP62750 156 aaKnown RBP13.06□□□□□ -0.32
XRCC1-201ENST00000262887 PRSS58Q8IYP2 241 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 MRPL13Q9BYD1 178 aaKnown RBP13.06□□□□□ -0.32
XRCC1-201ENST00000262887 NECAP2Q9NVZ3 263 aa13.06□□□□□ -0.32
XRCC1-201ENST00000262887 LRP4O75096 1905 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 PITX3O75364 302 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 DBHP09172 617 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 ZNF133P52736 654 aaPredicted RBP13.05□□□□□ -0.32
XRCC1-201ENST00000262887 RRADP55042 308 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 NSDHLQ15738 373 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 SP5Q6BEB4 398 aaPredicted RBP13.05□□□□□ -0.32
XRCC1-201ENST00000262887 LANCL3Q6ZV70 420 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 C7orf61Q8IZ16 206 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 CLDND2Q8NHS1 167 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 SNHG12Q9BXW3 62 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 SLC2A9Q9NRM0 540 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 CLDN34H7C241 214 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 FUT3P21217 361 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 OPRM1P35372 400 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 CARD17Q5XLA6 110 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 SLC16A14Q7RTX9 510 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 TMEM183AQ8IXX5 376 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 OR4D5Q8NGN0 318 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 RNASEH2CQ8TDP1 164 aaKnown RBP13.05□□□□□ -0.32
XRCC1-201ENST00000262887 ST8SIA1Q92185 356 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 MSI2Q96DH6 328 aaKnown RBP13.05□□□□□ -0.32
XRCC1-201ENST00000262887 RBMXL1Q96E39 390 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms