RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ZNF57Q68EA5 555 aaPredicted RBP11.22□□□□□ -0.61
SGCA-201ENST00000262018 OR10K2Q6IF99 312 aa11.22□□□□□ -0.61
SGCA-201ENST00000262018 GLIPR1L1Q6UWM5 242 aa11.22□□□□□ -0.61
SGCA-201ENST00000262018 PNLDC1Q8NA58 520 aaKnown RBP11.22□□□□□ -0.61
SGCA-201ENST00000262018 TECTBQ96PL2 329 aa11.22□□□□□ -0.61
SGCA-201ENST00000262018 GPER1Q99527 375 aa11.22□□□□□ -0.61
SGCA-201ENST00000262018 SLC6A7Q99884 636 aa11.22□□□□□ -0.61
SGCA-201ENST00000262018 MARVELD1Q9BSK0 173 aa11.22□□□□□ -0.61
SGCA-201ENST00000262018 UNKLQ9H9P5 680 aaKnown RBP11.22□□□□□ -0.61
SGCA-201ENST00000262018 TAS2R8Q9NYW2 309 aa11.22□□□□□ -0.61
SGCA-201ENST00000262018 GHRLQ9UBU3 117 aa11.22□□□□□ -0.61
SGCA-201ENST00000262018 RBMX2Q9Y388 322 aaKnown RBP11.22□□□□□ -0.61
SGCA-201ENST00000262018 TRAV18A0A075B6X5 111 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 B9A039 149 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 KDM4BO94953 1096 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 CELA3BP08861 270 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 SLC6A1P30531 599 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 PTGFRP43088 359 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 NAAAQ02083 359 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 FAHD2BQ6P2I3 314 aaPredicted RBP11.21□□□□□ -0.61
SGCA-201ENST00000262018 MRPL21Q7Z2W9 205 aaKnown RBP11.21□□□□□ -0.61
SGCA-201ENST00000262018 MYPOPQ86VE0 399 aaPredicted RBP11.21□□□□□ -0.61
SGCA-201ENST00000262018 TOMM5Q8N4H5 51 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 OR5L1Q8NGL2 311 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 OR52I2Q8NH67 350 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 NPRL2Q8WTW4 380 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 FCAMRQ8WWV6 532 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 FAM46BQ96A09 425 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 PHF21AQ96BD5 680 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 CPNE2Q96FN4 548 aaPredicted RBP11.21□□□□□ -0.61
SGCA-201ENST00000262018 FAHD2AQ96GK7 314 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 NEDD4LQ96PU5 975 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 NUDT16L1Q9BRJ7 211 aaKnown RBP11.21□□□□□ -0.61
SGCA-201ENST00000262018 POFUT1Q9H488 388 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 AUNIPQ9H7T9 357 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 PTTG3PQ9NZH4 202 aa11.21□□□□□ -0.61
SGCA-201ENST00000262018 PAIP2BQ9ULR5 123 aaKnown RBP11.21□□□□□ -0.61
SGCA-201ENST00000262018 LOC105371242A0A075B767 164 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 MEIOCA2RUB1 952 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 METTL21EPA6NDL7 271 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 DHFRP00374 187 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 MSMBP08118 114 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 FAM157BP0CG42 384 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 GDNFP39905 211 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 EIF2B2P49770 351 aaKnown RBP11.2□□□□□ -0.62
SGCA-201ENST00000262018 PPOXP50336 477 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 PRSS12P56730 875 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 ZP1P60852 638 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 KLF9Q13886 244 aaPredicted RBP11.2□□□□□ -0.62
SGCA-201ENST00000262018 GPR176Q14439 515 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 RNASE12Q5GAN4 147 aaKnown RBP11.2□□□□□ -0.62
SGCA-201ENST00000262018 RAB12Q6IQ22 244 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 LHFPL2Q6ZUX7 228 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 ZNF101Q8IZC7 436 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 CSNK2A3Q8NEV1 391 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 OR56B2PQ8NGI1 322 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 KCNG3Q8TAE7 436 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 DPAGT1Q9H3H5 408 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 CDH20Q9HBT6 801 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 MYEF2Q9P2K5 600 aaKnown RBP11.2□□□□□ -0.62
SGCA-201ENST00000262018 ZNF221Q9UK13 617 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 PPIAL4AQ9Y536 164 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 NUBP2Q9Y5Y2 271 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 CACNG2Q9Y698 323 aa11.2□□□□□ -0.62
SGCA-201ENST00000262018 IGHV2OR16-5A0A0B4J2B6 119 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 LYNX1G3V0Z9 82 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 RAB27BO00194 218 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 SULT1C2O00338 296 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 CDC14BO60729 498 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 CCNKO75909 580 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 SNAPC5O75971 98 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 CST4P01036 141 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 LYNX1P0DP58 116 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 FAUP35544 74 aaKnown RBP11.19□□□□□ -0.62
SGCA-201ENST00000262018 RBP2P50120 134 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 FUT6P51993 359 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 HLXQ14774 488 aaPredicted RBP11.19□□□□□ -0.62
SGCA-201ENST00000262018 DMRTC1Q5HYR2 192 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 VHLLQ6RSH7 139 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 ASCL4Q6XD76 172 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 RFPL4BQ6ZWI9 263 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 MOB3CQ70IA8 216 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 ZCCHC24Q8N2G6 241 aaKnown RBP11.19□□□□□ -0.62
SGCA-201ENST00000262018 BPIFB2Q8N4F0 458 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 TEX29Q8N6K0 151 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 ZBTB8BQ8NAP8 495 aaPredicted RBP11.19□□□□□ -0.62
SGCA-201ENST00000262018 TNFAIP8L1Q8WVP5 186 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 NEU4Q8WWR8 484 aaPredicted RBP11.19□□□□□ -0.62
SGCA-201ENST00000262018 PIGCQ92535 297 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 BORCS8Q96FH0 119 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 NARFLQ9H6Q4 476 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 EIF3KQ9UBQ5 218 aaKnown RBP11.19□□□□□ -0.62
SGCA-201ENST00000262018 ZNF107Q9UII5 783 aaPredicted RBP11.19□□□□□ -0.62
SGCA-201ENST00000262018 ING4Q9UNL4 249 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 SLC7A11Q9UPY5 501 aa11.19□□□□□ -0.62
SGCA-201ENST00000262018 IGKV1-27A0A075B6S5 117 aa11.18□□□□□ -0.62
SGCA-201ENST00000262018 CD300LBA8K4G0 201 aa11.18□□□□□ -0.62
SGCA-201ENST00000262018 CHRM2P08172 466 aa11.18□□□□□ -0.62
SGCA-201ENST00000262018 OR4A8P0C604 315 aa11.18□□□□□ -0.62
SGCA-201ENST00000262018 PTHLHP12272 177 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms