RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 HOXA1P49639 335 aaPredicted RBP13.19□□□□□ -0.3
DDX56-201ENST00000258772 UCP3P55916 312 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 PDCD1Q15116 288 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 PEA15Q15121 130 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 PIGCQ92535 297 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 SYT3Q9BQG1 590 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 PARP12Q9H0J9 701 aaKnown RBP13.19□□□□□ -0.3
DDX56-201ENST00000258772 WFDC1Q9HC57 220 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 XRCC2O43543 280 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 PDCD6O75340 191 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 SEC11BP0C7V7 166 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 TCN2P20062 427 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 GPR157Q5UAW9 335 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 LGI3Q8N145 548 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 OR52M1Q8NGK5 317 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 OR5L1Q8NGL2 311 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 OR11L1Q8NGX0 322 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 OR10D3Q8NH80 312 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 MOB3AQ96BX8 217 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 AKR1E2Q96JD6 320 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 ADGRG7Q96K78 797 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 STARD10Q9Y365 291 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 GPR137BO60478 399 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 DANCRP0C864 163 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 DUSP1P28562 367 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 PCBD1P61457 104 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 MALLQ13021 153 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 OR8B8Q15620 311 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 AVPI1Q5T686 147 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 RIPPLY2Q5TAB7 128 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 PLCXD3Q63HM9 321 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 Q6ZPA2 131 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 SKA3Q8IX90 412 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 GPR35Q9HC97 309 aa13.18□□□□□ -0.3
DDX56-201ENST00000258772 BORCS7-ASMTA0A0B4J1R7 106 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 CCDC163A0A0D9SF12 145 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 YKT6O15498 198 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 TSPAN15O95858 294 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 CLDN15P56746 228 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 ABLIM2Q6H8Q1 611 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 TMEM211Q6ICI0 200 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 FBXW12Q6X9E4 464 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.17□□□□□ -0.3
DDX56-201ENST00000258772 OR2V1Q8NHB1 315 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 SECTM1Q8WVN6 248 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 GINS3Q9BRX5 216 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 BIN3Q9NQY0 253 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 CACFD1Q9UGQ2 172 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 ZDHHC8Q9ULC8 765 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 ZNF816-ZNF321PA0A0X1KG74 233 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 COLCA2A8K830 154 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 SPP1P10451 314 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 FUT3P21217 361 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 SNCAP37840 140 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 RPL35P42766 123 aaKnown RBP13.17□□□□□ -0.3
DDX56-201ENST00000258772 GLP1RP43220 463 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 P2RY1P47900 373 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 AKR1D1P51857 326 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 RBM11P57052 281 aaKnown RBP13.17□□□□□ -0.3
DDX56-201ENST00000258772 IL13RA2Q14627 380 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 WIPI1Q5MNZ9 446 aaPredicted RBP13.17□□□□□ -0.3
DDX56-201ENST00000258772 CALHM1Q8IU99 346 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 DMBX1Q8NFW5 382 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 RSRP1Q9BUV0 290 aa13.17□□□□□ -0.3
DDX56-201ENST00000258772 LRRC3CA6NJW4 275 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 PCP4L1A6NKN8 68 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 ZNF587BE7ETH6 402 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 ST8SIA3O43173 380 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 PHF1O43189 567 aaPredicted RBP13.16□□□□□ -0.3
DDX56-201ENST00000258772 TRAPPC6AO75865 159 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 AADACP22760 399 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 UCP2P55851 309 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 Q0VFX4 171 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 MIDNQ504T8 468 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 ESRP2Q9H6T0 727 aaKnown RBP13.16□□□□□ -0.3
DDX56-201ENST00000258772 ZNF442Q9H7R0 627 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 SMCO4Q9NRQ5 59 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 P4HTMQ9NXG6 502 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 KPTNQ9Y664 436 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 NME2P1O60361 137 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 EDN3P14138 238 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 HOXA6P31267 233 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 PMELP40967 661 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 PPT1P50897 306 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 HERV-K104P61576 105 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 NHLH2Q02577 135 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 DAZAP2Q15038 168 aaPredicted RBP13.16□□□□□ -0.3
DDX56-201ENST00000258772 SHEQ5VZ18 495 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 COMMD1Q8N668 190 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 CCDC71LQ8N9Z2 235 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 TECTBQ96PL2 329 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 SCRT1Q9BWW7 348 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 LUZP4Q9P127 313 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 TMED3Q9Y3Q3 217 aa13.16□□□□□ -0.3
DDX56-201ENST00000258772 FREM1Q5H8C1 2179 aa13.15□□□□□ -0.3
DDX56-201ENST00000258772 ZNF98A6NK75 572 aa13.15□□□□□ -0.3
DDX56-201ENST00000258772 PATE3B3GLJ2 98 aa13.15□□□□□ -0.3
DDX56-201ENST00000258772 OR7C1O76099 320 aaPredicted RBP13.15□□□□□ -0.3
DDX56-201ENST00000258772 MMP7P09237 267 aaPredicted RBP13.15□□□□□ -0.3
DDX56-201ENST00000258772 NPBWR2P48146 333 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms