RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 U3KQ87 197 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 CACNA1CQ13936 2221 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 SLC38A11Q08AI6 406 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 ST3GAL2Q16842 350 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 ZBTB37Q5TC79 503 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 UBALD1Q8TB05 177 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 THYN1Q9P016 225 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 SCN4AP35499 1836 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 DEFB108AA8MXU0 73 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 BTNL3Q6UXE8 466 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 VSTM2AQ8TAG5 236 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 TNS1Q9HBL0 1735 aaKnown RBP16.73■□□□□ 0.27
PTPRE-201ENST00000254667 OR4C45A6NMZ5 311 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 TRDCB7Z8K6 153 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 PLPPR2Q96GM1 343 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 MARVELD1Q9BSK0 173 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 RBM38Q9H0Z9 239 aaKnown RBP16.73■□□□□ 0.27
PTPRE-201ENST00000254667 AAMDCQ9H7C9 122 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 IL36GQ9NZH8 169 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 TRIP11Q15643 1979 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 STARD6P59095 220 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 ZP4Q12836 540 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 ATP6V1FQ16864 119 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 MRGPRDQ8TDS7 321 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 SEBOXQ9HB31 216 aaPredicted RBP16.72■□□□□ 0.27
PTPRE-201ENST00000254667 PILRAQ9UKJ1 303 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 SLC22A18ASQ8N1D0 253 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 RHOFQ9HBH0 211 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 ANXA10Q9UJ72 324 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 MMP16P51512 607 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 PJVKQ0ZLH3 352 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 MPV17LQ2QL34 196 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 GGNBP1Q5YKI7 109 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 C1orf174Q8IYL3 243 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 CTDSP1Q9GZU7 261 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 STARD10Q9Y365 291 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 OOEPA6NGQ2 149 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 C3orf80F5H4A9 247 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 J3QT63 122 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 FBXW9Q5XUX1 488 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 TIPARPQ7Z3E1 657 aaKnown RBP16.72■□□□□ 0.27
PTPRE-201ENST00000254667 OR4S2Q8NH73 311 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 RPS4Y2Q8TD47 263 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 ONECUT2O95948 504 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 MVDP53602 400 aa16.72■□□□□ 0.27
PTPRE-201ENST00000254667 ANKRD31Q8N7Z5 1873 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 LANCL1O43813 399 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 CA11O75493 328 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 ACAA2P42765 397 aaKnown RBP16.71■□□□□ 0.27
PTPRE-201ENST00000254667 PRSS54Q6PEW0 395 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 LYPD8Q6UX82 237 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 TMEM147Q9BVK8 224 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 OPRK1P41145 380 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 C11orf91Q3C1V1 193 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 Q56UQ5 140 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 CLLU1Q5K131 121 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 DDA1Q9BW61 102 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 CACNG5Q9UF02 275 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 G3V3Q6 166 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 OR5I1Q13606 314 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 AKR1E2Q96JD6 320 aa16.71■□□□□ 0.27
PTPRE-201ENST00000254667 MRPS18AQ9NVS2 196 aaKnown RBP16.71■□□□□ 0.27
PTPRE-201ENST00000254667 GAR1Q9NY12 217 aaKnown RBP16.71■□□□□ 0.27
PTPRE-201ENST00000254667 LRRC3CA6NJW4 275 aa16.71■□□□□ 0.26
PTPRE-201ENST00000254667 TMEM210A6NLX4 147 aa16.71■□□□□ 0.26
PTPRE-201ENST00000254667 ZNF785A8K8V0 405 aa16.71■□□□□ 0.26
PTPRE-201ENST00000254667 ANKRD34CP0C6C1 535 aa16.71■□□□□ 0.26
PTPRE-201ENST00000254667 PAX6P26367 422 aa16.71■□□□□ 0.26
PTPRE-201ENST00000254667 LINC00596Q86U02 117 aa16.71■□□□□ 0.26
PTPRE-201ENST00000254667 DUSP18Q8NEJ0 188 aa16.71■□□□□ 0.26
PTPRE-201ENST00000254667 ABHD1Q96SE0 405 aa16.71■□□□□ 0.26
PTPRE-201ENST00000254667 SLC45A2Q9UMX9 530 aa16.71■□□□□ 0.26
PTPRE-201ENST00000254667 ATP6V1G2-DDX39BF2Z307 99 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 CRYBA1P05813 215 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 MESP2Q0VG99 397 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 DGAT2L6Q6ZPD8 337 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 OR5A2Q8NGI9 324 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 ABHD3Q8WU67 409 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 TMPRSS13Q9BYE2 586 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 NARFLQ9H6Q4 476 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 CDX4O14627 284 aaPredicted RBP16.7■□□□□ 0.26
PTPRE-201ENST00000254667 RBP4P02753 201 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 GZMHP20718 246 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 ASCL5Q7RTU5 278 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 SLC26A10Q8NG04 563 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 HOXD4P09016 255 aaPredicted RBP16.7■□□□□ 0.26
PTPRE-201ENST00000254667 OR5AC1P0C628 307 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 IRF3Q14653 427 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 C3AR1Q16581 482 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 OR4F17Q8NGA8 305 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 LRFN3Q9BTN0 628 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 WDR13Q9H1Z4 485 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 RNF7Q9UBF6 113 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 DTX4Q9Y2E6 619 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 DBX1A6NMT0 343 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 HNF1AP20823 631 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 PLPPR5Q32ZL2 321 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 NECAP1Q8NC96 275 aa16.7■□□□□ 0.26
PTPRE-201ENST00000254667 SERTM2A0A1B0GWG4 89 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 MPC2O95563 127 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms